Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 GTF2IP5-201ENST00000414608 731 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.97□□□□□ -1.45
RHBDL3P58872 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.97□□□□□ -1.45
RHBDL3P58872 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.97□□□□□ -1.45
RHBDL3P58872 AL645931.1-201ENST00000439737 410 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 RPL7AP61-201ENST00000443410 636 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.97□□□□□ -1.45
RHBDL3P58872 AL513533.1-201ENST00000453728 415 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.97□□□□□ -1.45
RHBDL3P58872 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.97□□□□□ -1.45
RHBDL3P58872 UBA52P3-201ENST00000491303 382 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 AC008897.1-201ENST00000494006 347 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 AC098976.1-201ENST00000513014 541 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 RN7SKP283-201ENST00000517197 270 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 AC079075.1-201ENST00000559543 878 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
RHBDL3P58872 DPRXP4-201ENST00000578053 568 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.97□□□□□ -1.45
RHBDL3P58872 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.97□□□□□ -1.45
RHBDL3P58872 AC068790.7-201ENST00000602347 528 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 AC020910.3-201ENST00000603701 874 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 AL391358.1-201ENST00000605342 190 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 RNU6-1192P-201ENST00000612197 107 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 RNU6-489P-201ENST00000618289 107 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.97□□□□□ -1.45
RHBDL3P58872 AC007275.1-201ENST00000621243 671 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.97□□□□□ -1.45
RHBDL3P58872 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
RHBDL3P58872 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
RHBDL3P58872 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 MTND4P9-201ENST00000507819 1346 ntBASIC5.97□□□□□ -1.45
RHBDL3P58872 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RHBDL3P58872 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
RHBDL3P58872 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDL3P58872 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
RHBDL3P58872 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDL3P58872 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
RHBDL3P58872 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RHBDL3P58872 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.96□□□□□ -1.46
RHBDL3P58872 AC011155.1-201ENST00000316512 456 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 MIR133A2-201ENST00000347538 102 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 AL021331.1-201ENST00000402817 582 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 SNORA11C-201ENST00000408532 129 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 RN7SKP100-201ENST00000411258 284 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 RNU2-6P-201ENST00000411404 190 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 GPS2P1-201ENST00000411761 986 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.96□□□□□ -1.46
RHBDL3P58872 AL354868.1-201ENST00000417077 482 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 NIPA2P1-201ENST00000426223 976 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDL3P58872 AL031736.2-201ENST00000426573 787 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 AP001324.1-201ENST00000428553 399 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 AC011242.1-201ENST00000433596 1158 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 RN7SL860P-201ENST00000473738 223 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 RN7SL441P-201ENST00000492388 296 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 AC098799.3-201ENST00000506095 438 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.96□□□□□ -1.46
RHBDL3P58872 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDL3P58872 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDL3P58872 HIGD1AP5-201ENST00000529959 259 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 AC124293.1-201ENST00000530034 493 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 MTND5P21-201ENST00000531961 522 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDL3P58872 AC068993.1-201ENST00000546724 589 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDL3P58872 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.96□□□□□ -1.46
RHBDL3P58872 AC022884.2-201ENST00000578535 580 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 MIR3667-201ENST00000581025 74 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 RN7SL622P-201ENST00000585292 275 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 VN1R88P-201ENST00000596787 292 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.96□□□□□ -1.46
RHBDL3P58872 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.96□□□□□ -1.46
RHBDL3P58872 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
RHBDL3P58872 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDL3P58872 AL161616.1-201ENST00000611867 286 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 MIR6780A-201ENST00000615089 68 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 AP003072.4-201ENST00000624580 310 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.96□□□□□ -1.46
RHBDL3P58872 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RHBDL3P58872 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDL3P58872 LINC01109-201ENST00000603837 3081 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RHBDL3P58872 SAMMSON-226ENST00000642089 1582 ntBASIC5.96□□□□□ -1.46
RHBDL3P58872 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDL3P58872 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
RHBDL3P58872 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RHBDL3P58872 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RHBDL3P58872 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RHBDL3P58872 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDL3P58872 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms