Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL160275.2-201ENST00000412010 394 ntBASIC5.67□□□□□ -1.5
RIPK4P57078 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.67□□□□□ -1.5
RIPK4P57078 AC091390.1-201ENST00000433904 331 ntBASIC5.67□□□□□ -1.5
RIPK4P57078 AL512326.1-201ENST00000443050 721 ntBASIC5.67□□□□□ -1.5
RIPK4P57078 AC005008.1-201ENST00000456151 612 ntBASIC5.67□□□□□ -1.5
RIPK4P57078 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.67□□□□□ -1.5
RIPK4P57078 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.67□□□□□ -1.5
RIPK4P57078 RPL21P7-201ENST00000557463 483 ntBASIC5.67□□□□□ -1.5
RIPK4P57078 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.67□□□□□ -1.5
RIPK4P57078 AC105036.1-201ENST00000566222 271 ntBASIC5.67□□□□□ -1.5
RIPK4P57078 AC007066.2-202ENST00000566531 914 ntBASIC5.67□□□□□ -1.5
RIPK4P57078 AC069366.1-201ENST00000583159 838 ntBASIC5.67□□□□□ -1.5
RIPK4P57078 AC105105.5-201ENST00000622635 1294 ntBASIC5.67□□□□□ -1.5
RIPK4P57078 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RIPK4P57078 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK4P57078 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RIPK4P57078 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK4P57078 AC139713.2-215ENST00000641428 5037 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK4P57078 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
RIPK4P57078 AC099654.3-201ENST00000447087 1546 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 SNORD66.1-201ENST00000391230 76 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK4P57078 ST13P16-201ENST00000401760 781 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 AL121834.1-202ENST00000404494 277 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 RNA5SP36-201ENST00000410197 133 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 RN7SKP235-201ENST00000410662 305 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.66□□□□□ -1.5
RIPK4P57078 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.66□□□□□ -1.5
RIPK4P57078 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.66□□□□□ -1.5
RIPK4P57078 TMX2P1-201ENST00000436507 708 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.66□□□□□ -1.5
RIPK4P57078 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.66□□□□□ -1.5
RIPK4P57078 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.66□□□□□ -1.5
RIPK4P57078 NUTF2P3-201ENST00000448540 384 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.66□□□□□ -1.5
RIPK4P57078 RN7SL385P-201ENST00000468873 276 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 RN7SL817P-201ENST00000480777 288 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 AC105137.1-201ENST00000484355 562 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.66□□□□□ -1.5
RIPK4P57078 AC008958.1-201ENST00000511047 682 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.66□□□□□ -1.5
RIPK4P57078 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.66□□□□□ -1.5
RIPK4P57078 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RIPK4P57078 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.66□□□□□ -1.5
RIPK4P57078 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.66□□□□□ -1.5
RIPK4P57078 AL158196.1-201ENST00000616786 434 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK4P57078 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RIPK4P57078 MIR3653-201ENST00000625572 110 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK4P57078 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK4P57078 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.66□□□□□ -1.5
RIPK4P57078 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK4P57078 THAP12P8-201ENST00000447914 2115 ntBASIC5.66□□□□□ -1.5
RIPK4P57078 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.66□□□□□ -1.5
RIPK4P57078 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.66□□□□□ -1.5
RIPK4P57078 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK4P57078 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
RIPK4P57078 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RIPK4P57078 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.65□□□□□ -1.5
RIPK4P57078 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.65□□□□□ -1.5
RIPK4P57078 RPL6P29-201ENST00000414863 865 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.65□□□□□ -1.5
RIPK4P57078 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RIPK4P57078 AL132765.1-201ENST00000434165 553 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.65□□□□□ -1.5
RIPK4P57078 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 RPL10P17-201ENST00000453852 316 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.65□□□□□ -1.5
RIPK4P57078 RPL35P6-201ENST00000490024 372 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 RPS26P24-201ENST00000497656 331 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 AC010374.1-201ENST00000503762 1237 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 PARP4P3-201ENST00000510265 317 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 RNA5SP519-201ENST00000516480 119 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.65□□□□□ -1.5
RIPK4P57078 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.65□□□□□ -1.5
RIPK4P57078 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.65□□□□□ -1.5
RIPK4P57078 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.65□□□□□ -1.5
RIPK4P57078 SLC25A36P1-201ENST00000590111 465 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 IPO5P1-202ENST00000600039 287 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 AC026979.4-201ENST00000606555 645 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 AC006338.2-201ENST00000616864 791 ntBASIC5.65□□□□□ -1.5
RIPK4P57078 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RIPK4P57078 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RIPK4P57078 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.64□□□□□ -1.51
RIPK4P57078 AC006971.1-201ENST00000407916 4486 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIPK4P57078 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RIPK4P57078 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.64□□□□□ -1.51
RIPK4P57078 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIPK4P57078 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIPK4P57078 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RIPK4P57078 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RIPK4P57078 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.64□□□□□ -1.51
RIPK4P57078 RNU1-14P-201ENST00000362759 152 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 RNA5SP22-201ENST00000365393 109 ntBASIC5.64□□□□□ -1.51
RIPK4P57078 AL161909.1-201ENST00000397390 712 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms