Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC108941.1-201ENST00000502853 530 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.64□□□□□ -1.51
GFRA1P56159 AC108475.1-201ENST00000507880 950 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 RNA5SP116-201ENST00000516132 98 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 OR5M7P-201ENST00000526140 972 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 MTND4LP18-201ENST00000526864 291 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AC013828.2-201ENST00000532487 235 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA1P56159 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.64□□□□□ -1.51
GFRA1P56159 SULT1C2P1-202ENST00000562418 459 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 BGLT3-201ENST00000564523 994 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.64□□□□□ -1.51
GFRA1P56159 AC002310.3-201ENST00000569728 723 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.64□□□□□ -1.51
GFRA1P56159 MIR5697-201ENST00000578045 78 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.64□□□□□ -1.51
GFRA1P56159 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AL499605.1-201ENST00000604628 403 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 LSM1P2-201ENST00000604911 322 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AL591167.1-201ENST00000607321 456 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AC006924.1-201ENST00000610750 559 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AP001506.1-201ENST00000615444 211 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA1P56159 AC005618.4-201ENST00000625053 554 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA1P56159 GDI2P1-201ENST00000429312 1336 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA1P56159 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA1P56159 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA1P56159 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA1P56159 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA1P56159 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.64□□□□□ -1.51
GFRA1P56159 AC096921.2-201ENST00000561507 1916 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA1P56159 AL161901.1-201ENST00000624954 3425 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA1P56159 AC104966.1-201ENST00000467010 1464 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
GFRA1P56159 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA1P56159 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.63□□□□□ -1.51
GFRA1P56159 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
GFRA1P56159 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
GFRA1P56159 AL591848.4-201ENST00000567832 3472 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 AC034229.2-201ENST00000566945 2508 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
GFRA1P56159 OR4A15-201ENST00000314706 1035 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
GFRA1P56159 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
GFRA1P56159 PRRC2CP1-201ENST00000404428 159 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 MIR320C1-201ENST00000408566 88 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
GFRA1P56159 AC007742.1-201ENST00000425789 329 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA1P56159 RPL37P1-201ENST00000432310 284 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 AL451136.1-201ENST00000435399 325 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 PNKDP1-201ENST00000435914 430 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 ELOCP26-201ENST00000436067 329 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 AC073614.1-201ENST00000438690 650 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA1P56159 MTATP6P30-201ENST00000443540 664 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 RPL7P36-201ENST00000444633 681 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 AC097463.1-201ENST00000447288 481 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 WASF1P1-201ENST00000447560 1131 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.63□□□□□ -1.51
GFRA1P56159 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 RANP2-201ENST00000456833 229 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 AP002884.1-201ENST00000479691 655 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 AC068522.1-201ENST00000482895 345 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA1P56159 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA1P56159 FAM172BP-201ENST00000487497 1089 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA1P56159 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
GFRA1P56159 DUTP7-201ENST00000507982 486 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 NDUFB4P2-201ENST00000509515 391 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 AC090958.1-201ENST00000511122 351 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 AC108064.1-201ENST00000513791 460 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA1P56159 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA1P56159 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.63□□□□□ -1.51
GFRA1P56159 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.63□□□□□ -1.51
GFRA1P56159 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA1P56159 MRPS21P8-201ENST00000569196 235 ntBASIC5.63□□□□□ -1.51
GFRA1P56159 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA1P56159 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms