Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.38□□□□□ -1.71
PKNOX1P55347 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.38□□□□□ -1.71
PKNOX1P55347 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PKNOX1P55347 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
PKNOX1P55347 AC068254.2-201ENST00000623938 3577 ntBASIC4.38□□□□□ -1.71
PKNOX1P55347 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PKNOX1P55347 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PKNOX1P55347 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PKNOX1P55347 A2MP1-204ENST00000566278 4130 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PKNOX1P55347 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PKNOX1P55347 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PKNOX1P55347 AC021146.4-201ENST00000309229 279 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PKNOX1P55347 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PKNOX1P55347 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PKNOX1P55347 MIR448-201ENST00000362131 111 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PKNOX1P55347 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PKNOX1P55347 AC092642.1-201ENST00000392417 425 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AL109941.1-201ENST00000401925 229 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AL121834.1-202ENST00000404494 277 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AL136131.1-201ENST00000406079 803 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 EIF4A1P3-201ENST00000411521 244 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
PKNOX1P55347 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.37□□□□□ -1.71
PKNOX1P55347 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.37□□□□□ -1.71
PKNOX1P55347 AL357520.1-201ENST00000441557 453 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.37□□□□□ -1.71
PKNOX1P55347 GEMIN8P3-201ENST00000445417 720 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AC012671.1-201ENST00000451912 203 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.37□□□□□ -1.71
PKNOX1P55347 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AC004453.1-201ENST00000487895 408 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AC011005.3-201ENST00000491624 395 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AC015795.1-201ENST00000513669 327 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 RNA5SP154-201ENST00000516193 111 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AC022784.5-201ENST00000522241 437 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.37□□□□□ -1.71
PKNOX1P55347 AC109635.6-201ENST00000525487 1113 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.37□□□□□ -1.71
PKNOX1P55347 PCNPP1-201ENST00000552501 511 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.37□□□□□ -1.71
PKNOX1P55347 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.37□□□□□ -1.71
PKNOX1P55347 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.37□□□□□ -1.71
PKNOX1P55347 AC091042.1-201ENST00000579213 173 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.37□□□□□ -1.71
PKNOX1P55347 SNX6P1-201ENST00000601728 1224 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.37□□□□□ -1.71
PKNOX1P55347 AC021106.3-201ENST00000623925 531 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 AC007546.2-201ENST00000623996 360 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 BMS1P21-201ENST00000634565 365 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.37□□□□□ -1.71
PKNOX1P55347 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.37□□□□□ -1.71
PKNOX1P55347 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.37□□□□□ -1.71
PKNOX1P55347 KPNA2P2-201ENST00000419546 1489 ntBASIC4.37□□□□□ -1.71
PKNOX1P55347 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PKNOX1P55347 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKNOX1P55347 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.36□□□□□ -1.71
PKNOX1P55347 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.36□□□□□ -1.71
PKNOX1P55347 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKNOX1P55347 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
PKNOX1P55347 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKNOX1P55347 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PKNOX1P55347 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKNOX1P55347 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PKNOX1P55347 AL590240.1-201ENST00000334118 313 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PKNOX1P55347 SPTLC1P2-201ENST00000407089 121 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.36□□□□□ -1.71
PKNOX1P55347 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.36□□□□□ -1.71
PKNOX1P55347 RPS12P5-201ENST00000423449 371 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 IPMKP1-201ENST00000425988 855 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PKNOX1P55347 MTCO1P45-201ENST00000431457 267 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 PSMD10P3-201ENST00000437000 448 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 HLA-N-201ENST00000437516 135 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 AC069285.2-201ENST00000440210 275 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 YWHAZP2-201ENST00000440317 728 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 AC011753.3-201ENST00000443436 406 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 AC091685.2-201ENST00000454924 864 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.36□□□□□ -1.71
PKNOX1P55347 AC026348.1-201ENST00000462549 1053 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.36□□□□□ -1.71
PKNOX1P55347 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.36□□□□□ -1.71
PKNOX1P55347 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.36□□□□□ -1.71
PKNOX1P55347 HMGB3P13-201ENST00000511263 607 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.36□□□□□ -1.71
PKNOX1P55347 snoU109.6-201ENST00000516831 118 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.36□□□□□ -1.71
PKNOX1P55347 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.36□□□□□ -1.71
PKNOX1P55347 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.36□□□□□ -1.71
PKNOX1P55347 AC009268.1-201ENST00000561352 1203 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 RPL23AP97-201ENST00000568955 471 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.36□□□□□ -1.71
PKNOX1P55347 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.36□□□□□ -1.71
PKNOX1P55347 AL158196.1-201ENST00000616786 434 ntBASIC4.36□□□□□ -1.71
PKNOX1P55347 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.36□□□□□ -1.71
PKNOX1P55347 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.36□□□□□ -1.71
PKNOX1P55347 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms