Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
CDH6P55285 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH6P55285 RNA5SP307-201ENST00000362863 116 ntBASIC4.62□□□□□ -1.67
CDH6P55285 RNA5SP22-201ENST00000365393 109 ntBASIC4.62□□□□□ -1.67
CDH6P55285 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH6P55285 EIF4A1P3-201ENST00000411521 244 ntBASIC4.62□□□□□ -1.67
CDH6P55285 RPS20P14-201ENST00000412545 360 ntBASIC4.62□□□□□ -1.67
CDH6P55285 RPL21P108-201ENST00000413857 481 ntBASIC4.62□□□□□ -1.67
CDH6P55285 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH6P55285 SNRPFP1-201ENST00000414761 252 ntBASIC4.62□□□□□ -1.67
CDH6P55285 AC092570.3-201ENST00000420113 693 ntBASIC4.62□□□□□ -1.67
CDH6P55285 UQCRBP1-201ENST00000421129 336 ntBASIC4.62□□□□□ -1.67
CDH6P55285 SBDSP1-204ENST00000453858 737 ntBASIC4.62□□□□□ -1.67
CDH6P55285 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.62□□□□□ -1.67
CDH6P55285 SEPT7P6-201ENST00000469999 1143 ntBASIC4.62□□□□□ -1.67
CDH6P55285 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH6P55285 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH6P55285 RNU6-319P-201ENST00000516025 108 ntBASIC4.62□□□□□ -1.67
CDH6P55285 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH6P55285 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.62□□□□□ -1.67
CDH6P55285 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH6P55285 AC087283.1-201ENST00000604029 1074 ntBASIC4.62□□□□□ -1.67
CDH6P55285 Z98200.1-201ENST00000607298 470 ntBASIC4.62□□□□□ -1.67
CDH6P55285 AC100847.1-201ENST00000611316 481 ntBASIC4.62□□□□□ -1.67
CDH6P55285 BMS1P21-201ENST00000634565 365 ntBASIC4.62□□□□□ -1.67
CDH6P55285 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH6P55285 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH6P55285 MFSD8-242ENST00000641690 4199 ntBASIC4.62□□□□□ -1.67
CDH6P55285 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH6P55285 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CDH6P55285 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CDH6P55285 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH6P55285 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CDH6P55285 AC010132.2-201ENST00000295493 1043 ntBASIC4.61□□□□□ -1.67
CDH6P55285 ATP5F1P2-201ENST00000398143 760 ntBASIC4.61□□□□□ -1.67
CDH6P55285 GLULP6-201ENST00000399502 913 ntBASIC4.61□□□□□ -1.67
CDH6P55285 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH6P55285 RPS3AP23-201ENST00000401762 784 ntBASIC4.61□□□□□ -1.67
CDH6P55285 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH6P55285 AC119751.6-201ENST00000416712 186 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AC009302.1-201ENST00000417147 390 ntBASIC4.61□□□□□ -1.67
CDH6P55285 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH6P55285 RPL7AP25-201ENST00000423357 805 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AC022022.1-201ENST00000430304 178 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.61□□□□□ -1.67
CDH6P55285 APOOP2-201ENST00000461561 539 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AC008897.1-201ENST00000494006 347 ntBASIC4.61□□□□□ -1.67
CDH6P55285 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH6P55285 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.61□□□□□ -1.67
CDH6P55285 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH6P55285 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH6P55285 AP000827.1-201ENST00000527814 258 ntBASIC4.61□□□□□ -1.67
CDH6P55285 OR8X1P-201ENST00000534542 869 ntBASIC4.61□□□□□ -1.67
CDH6P55285 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH6P55285 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH6P55285 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH6P55285 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH6P55285 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH6P55285 AC091979.2-201ENST00000607514 214 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AC004948.1-201ENST00000609858 672 ntBASIC4.61□□□□□ -1.67
CDH6P55285 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AL138721.1-201ENST00000616756 179 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AL356274.1-201ENST00000617064 410 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AC105105.5-201ENST00000622635 1294 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AC015908.5-201ENST00000623289 343 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AC073342.3-201ENST00000624211 193 ntBASIC4.61□□□□□ -1.67
CDH6P55285 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH6P55285 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.61□□□□□ -1.67
CDH6P55285 AL596275.2-204ENST00000641628 552 ntBASIC4.61□□□□□ -1.67
CDH6P55285 AL596275.2-206ENST00000641957 626 ntBASIC4.61□□□□□ -1.67
CDH6P55285 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CDH6P55285 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH6P55285 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CDH6P55285 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH6P55285 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH6P55285 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH6P55285 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH6P55285 AC012618.3-205ENST00000637896 1496 ntBASIC4.61□□□□□ -1.67
CDH6P55285 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH6P55285 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH6P55285 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH6P55285 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CDH6P55285 AC110792.3-201ENST00000595906 1614 ntBASIC4.61□□□□□ -1.67
CDH6P55285 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH6P55285 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH6P55285 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH6P55285 MIR937-201ENST00000401271 86 ntBASIC4.6□□□□□ -1.67
CDH6P55285 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH6P55285 SNORA74C-2-201ENST00000411179 201 ntBASIC4.6□□□□□ -1.67
CDH6P55285 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH6P55285 PDSS1P1-201ENST00000422953 1114 ntBASIC4.6□□□□□ -1.67
CDH6P55285 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH6P55285 UBE2V1P3-201ENST00000439651 417 ntBASIC4.6□□□□□ -1.67
CDH6P55285 AL138878.2-201ENST00000440581 1241 ntBASIC4.6□□□□□ -1.67
CDH6P55285 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH6P55285 ARL2BPP10-201ENST00000446487 531 ntBASIC4.6□□□□□ -1.67
CDH6P55285 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH6P55285 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH6P55285 RPS29P22-201ENST00000472363 168 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms