Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GPC3P51654 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.12□□□□□ -1.59
GPC3P51654 AC008782.1-201ENST00000603386 430 ntBASIC5.12□□□□□ -1.59
GPC3P51654 RNF138P2-201ENST00000603490 592 ntBASIC5.12□□□□□ -1.59
GPC3P51654 AL008729.2-201ENST00000606393 473 ntBASIC5.12□□□□□ -1.59
GPC3P51654 MIR6758-201ENST00000620653 63 ntBASIC5.12□□□□□ -1.59
GPC3P51654 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GPC3P51654 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GPC3P51654 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GPC3P51654 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GPC3P51654 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.12□□□□□ -1.59
GPC3P51654 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.12□□□□□ -1.59
GPC3P51654 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
GPC3P51654 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GPC3P51654 AC104118.1-201ENST00000607625 1589 ntBASIC5.12□□□□□ -1.59
GPC3P51654 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
GPC3P51654 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GPC3P51654 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GPC3P51654 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
GPC3P51654 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
GPC3P51654 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GPC3P51654 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GPC3P51654 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
GPC3P51654 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
GPC3P51654 RNU4-39P-201ENST00000362455 127 ntBASIC5.11□□□□□ -1.59
GPC3P51654 RNU1-83P-201ENST00000363426 164 ntBASIC5.11□□□□□ -1.59
GPC3P51654 SNORA62-201ENST00000365493 153 ntBASIC5.11□□□□□ -1.59
GPC3P51654 COX6CP17-201ENST00000421389 185 ntBASIC5.11□□□□□ -1.59
GPC3P51654 AL732292.1-201ENST00000426692 226 ntBASIC5.11□□□□□ -1.59
GPC3P51654 RPL12P28-201ENST00000430852 489 ntBASIC5.11□□□□□ -1.59
GPC3P51654 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.11□□□□□ -1.59
GPC3P51654 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GPC3P51654 TDGF1P1-201ENST00000445734 527 ntBASIC5.11□□□□□ -1.59
GPC3P51654 MTND2P28-201ENST00000457540 1044 ntBASIC5.11□□□□□ -1.59
GPC3P51654 RPL5P13-201ENST00000462840 709 ntBASIC5.11□□□□□ -1.59
GPC3P51654 AC013356.1-201ENST00000489027 564 ntBASIC5.11□□□□□ -1.59
GPC3P51654 RNA5SP360-201ENST00000516555 118 ntBASIC5.11□□□□□ -1.59
GPC3P51654 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.11□□□□□ -1.59
GPC3P51654 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.11□□□□□ -1.59
GPC3P51654 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.11□□□□□ -1.59
GPC3P51654 MIR4277-201ENST00000578298 84 ntBASIC5.11□□□□□ -1.59
GPC3P51654 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.11□□□□□ -1.59
GPC3P51654 MIR4697-201ENST00000582977 78 ntBASIC5.11□□□□□ -1.59
GPC3P51654 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.11□□□□□ -1.59
GPC3P51654 AC068020.1-201ENST00000594215 661 ntBASIC5.11□□□□□ -1.59
GPC3P51654 AC130352.1-201ENST00000602979 661 ntBASIC5.11□□□□□ -1.59
GPC3P51654 AC123786.2-201ENST00000603459 275 ntBASIC5.11□□□□□ -1.59
GPC3P51654 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.11□□□□□ -1.59
GPC3P51654 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.11□□□□□ -1.59
GPC3P51654 AC083809.1-201ENST00000615051 472 ntBASIC5.11□□□□□ -1.59
GPC3P51654 AC015871.5-202ENST00000623252 701 ntBASIC5.11□□□□□ -1.59
GPC3P51654 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.11□□□□□ -1.59
GPC3P51654 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GPC3P51654 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.11□□□□□ -1.59
GPC3P51654 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
GPC3P51654 AL031119.1-201ENST00000404707 1879 ntBASIC5.11□□□□□ -1.59
GPC3P51654 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GPC3P51654 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
GPC3P51654 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GPC3P51654 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC3P51654 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC3P51654 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC3P51654 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC3P51654 RNA5SP447-201ENST00000363749 119 ntBASIC5.1□□□□□ -1.59
GPC3P51654 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC3P51654 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC3P51654 GSTA12P-201ENST00000402398 508 ntBASIC5.1□□□□□ -1.59
GPC3P51654 Z98745.1-201ENST00000402553 494 ntBASIC5.1□□□□□ -1.59
GPC3P51654 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC3P51654 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GPC3P51654 RNU6-564P-201ENST00000410983 104 ntBASIC5.1□□□□□ -1.59
GPC3P51654 P2RY10P2-201ENST00000416730 913 ntBASIC5.1□□□□□ -1.59
GPC3P51654 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.1□□□□□ -1.59
GPC3P51654 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC3P51654 EIF4A1P1-201ENST00000420241 934 ntBASIC5.1□□□□□ -1.59
GPC3P51654 SALL4P2-201ENST00000423288 2910 ntBASIC5.1□□□□□ -1.59
GPC3P51654 AL445433.1-201ENST00000457507 257 ntBASIC5.1□□□□□ -1.59
GPC3P51654 CYCSP34-201ENST00000458172 304 ntBASIC5.1□□□□□ -1.59
GPC3P51654 SCARNA10-201ENST00000459255 330 ntBASIC5.1□□□□□ -1.59
GPC3P51654 EIF2S2P4-201ENST00000461070 984 ntBASIC5.1□□□□□ -1.59
GPC3P51654 CCDC75P1-201ENST00000469247 791 ntBASIC5.1□□□□□ -1.59
GPC3P51654 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC3P51654 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC3P51654 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC3P51654 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC3P51654 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC3P51654 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.1□□□□□ -1.59
GPC3P51654 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC3P51654 AC068831.4-201ENST00000556118 109 ntBASIC5.1□□□□□ -1.59
GPC3P51654 AC068714.1-201ENST00000559623 800 ntBASIC5.1□□□□□ -1.59
GPC3P51654 AC125257.1-201ENST00000560400 2930 ntBASIC5.1□□□□□ -1.59
GPC3P51654 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC3P51654 AC115286.1-201ENST00000604298 434 ntBASIC5.1□□□□□ -1.59
GPC3P51654 IMMP1LP1-201ENST00000605170 488 ntBASIC5.1□□□□□ -1.59
GPC3P51654 AL356218.2-201ENST00000605264 187 ntBASIC5.1□□□□□ -1.59
GPC3P51654 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC3P51654 AL121873.1-201ENST00000616013 524 ntBASIC5.1□□□□□ -1.59
GPC3P51654 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
GPC3P51654 AC009229.4-201ENST00000623854 1947 ntBASIC5.1□□□□□ -1.59
GPC3P51654 AC019080.5-201ENST00000624891 757 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms