Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.74□□□□□ -1.65
SOX2P48431 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 ACA64.1-201ENST00000459171 127 ntBASIC4.74□□□□□ -1.65
SOX2P48431 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.74□□□□□ -1.65
SOX2P48431 AC104339.1-201ENST00000465478 348 ntBASIC4.74□□□□□ -1.65
SOX2P48431 RPS23P6-201ENST00000466136 431 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AP000797.2-201ENST00000475768 606 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.74□□□□□ -1.65
SOX2P48431 AL035404.1-201ENST00000497982 568 ntBASIC4.74□□□□□ -1.65
SOX2P48431 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.74□□□□□ -1.65
SOX2P48431 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.74□□□□□ -1.65
SOX2P48431 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 XKRY-201ENST00000510392 1100 ntBASIC4.74□□□□□ -1.65
SOX2P48431 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.74□□□□□ -1.65
SOX2P48431 AC008837.2-201ENST00000513076 418 ntBASIC4.74□□□□□ -1.65
SOX2P48431 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.74□□□□□ -1.65
SOX2P48431 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.74□□□□□ -1.65
SOX2P48431 MRPS16P1-201ENST00000523462 412 ntBASIC4.74□□□□□ -1.65
SOX2P48431 OR8A2P-201ENST00000528631 952 ntBASIC4.74□□□□□ -1.65
SOX2P48431 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.74□□□□□ -1.65
SOX2P48431 AP002373.2-201ENST00000541631 1060 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.74□□□□□ -1.65
SOX2P48431 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.74□□□□□ -1.65
SOX2P48431 AC079171.1-201ENST00000568788 914 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AC002310.3-201ENST00000569728 723 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.74□□□□□ -1.65
SOX2P48431 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 MTCYBP13-201ENST00000578634 1093 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 AC006272.2-201ENST00000594725 163 ntBASIC4.74□□□□□ -1.65
SOX2P48431 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.74□□□□□ -1.65
SOX2P48431 AC105129.3-201ENST00000605455 485 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AL451086.1-201ENST00000605596 223 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 AL354976.1-201ENST00000613843 387 ntBASIC4.74□□□□□ -1.65
SOX2P48431 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 AC023509.5-201ENST00000617434 807 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AC026124.2-201ENST00000621847 656 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AC079248.2-201ENST00000623779 326 ntBASIC4.74□□□□□ -1.65
SOX2P48431 MIR4278-201ENST00000636094 69 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AF001550.2-201ENST00000636643 217 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.74□□□□□ -1.65
SOX2P48431 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 ELL2P3-201ENST00000457883 1602 ntBASIC4.74□□□□□ -1.65
SOX2P48431 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 SRRM1P3-201ENST00000426911 2678 ntBASIC4.74□□□□□ -1.65
SOX2P48431 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SOX2P48431 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 SGO1P1-201ENST00000603525 1447 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AC046144.1-201ENST00000478559 1853 ntBASIC4.73□□□□□ -1.65
SOX2P48431 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
SOX2P48431 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SOX2P48431 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 HMGB1P5-201ENST00000255320 642 ntBASIC4.73□□□□□ -1.65
SOX2P48431 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SOX2P48431 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SOX2P48431 MIR16-1-201ENST00000385271 89 ntBASIC4.73□□□□□ -1.65
SOX2P48431 RPL21P67-201ENST00000402896 478 ntBASIC4.73□□□□□ -1.65
SOX2P48431 RNA5SP431-201ENST00000410312 120 ntBASIC4.73□□□□□ -1.65
SOX2P48431 RNU6-757P-201ENST00000410334 100 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.73□□□□□ -1.65
SOX2P48431 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.73□□□□□ -1.65
SOX2P48431 AKR1B10P1-201ENST00000425765 942 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AC127526.2-201ENST00000426436 775 ntBASIC4.73□□□□□ -1.65
SOX2P48431 HSPD1P12-201ENST00000429127 1069 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.73□□□□□ -1.65
SOX2P48431 TCEA1P3-201ENST00000443005 880 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AL450023.1-201ENST00000450868 751 ntBASIC4.73□□□□□ -1.65
SOX2P48431 PRPF38AP1-201ENST00000451976 933 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.73□□□□□ -1.65
SOX2P48431 AL445669.2-201ENST00000454425 421 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AL133244.1-201ENST00000456007 258 ntBASIC4.73□□□□□ -1.65
SOX2P48431 MTND2P28-201ENST00000457540 1044 ntBASIC4.73□□□□□ -1.65
SOX2P48431 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SOX2P48431 GAPDHP36-201ENST00000480688 918 ntBASIC4.73□□□□□ -1.65
SOX2P48431 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
SOX2P48431 AC098799.3-201ENST00000506095 438 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AC111000.2-201ENST00000507775 550 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.73□□□□□ -1.65
SOX2P48431 AC016559.2-201ENST00000510759 359 ntBASIC4.73□□□□□ -1.65
SOX2P48431 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.73□□□□□ -1.65
SOX2P48431 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 AC108471.1-201ENST00000513977 287 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms