Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SLC1A1P43005 PDCD5P1-201ENST00000543528 309 ntBASIC4.6□□□□□ -1.67
SLC1A1P43005 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.6□□□□□ -1.67
SLC1A1P43005 AC069240.1-201ENST00000548774 375 ntBASIC4.6□□□□□ -1.67
SLC1A1P43005 AL352979.3-201ENST00000553515 247 ntBASIC4.6□□□□□ -1.67
SLC1A1P43005 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC1A1P43005 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SLC1A1P43005 AC069061.3-201ENST00000582254 823 ntBASIC4.6□□□□□ -1.67
SLC1A1P43005 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.6□□□□□ -1.67
SLC1A1P43005 AC010615.3-201ENST00000597319 394 ntBASIC4.6□□□□□ -1.67
SLC1A1P43005 AL049536.1-201ENST00000625043 744 ntBASIC4.6□□□□□ -1.67
SLC1A1P43005 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC1A1P43005 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC1A1P43005 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC1A1P43005 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC1A1P43005 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC1A1P43005 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC1A1P43005 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
SLC1A1P43005 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SLC1A1P43005 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.6□□□□□ -1.67
SLC1A1P43005 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC1A1P43005 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SLC1A1P43005 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC1A1P43005 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC1A1P43005 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SLC1A1P43005 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC1A1P43005 Y_RNA.62-201ENST00000362840 99 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC1A1P43005 UQCRBP1-201ENST00000421129 336 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 IPMKP1-201ENST00000425988 855 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC1A1P43005 HLA-N-201ENST00000437516 135 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC1A1P43005 AC133473.1-201ENST00000455173 299 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 AC110749.1-201ENST00000462007 357 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SLC1A1P43005 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SLC1A1P43005 ATP1B1P1-201ENST00000509767 915 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC1A1P43005 SNORD116-30-201ENST00000516468 85 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.59□□□□□ -1.67
SLC1A1P43005 NPM1P6-201ENST00000521088 871 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 AC018442.3-201ENST00000523025 183 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.59□□□□□ -1.67
SLC1A1P43005 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 OR5D15P-201ENST00000531671 942 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC1A1P43005 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC1A1P43005 MIR4675-201ENST00000577898 77 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 SNORD39.2-201ENST00000579995 76 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 MIR4270-201ENST00000581799 70 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC1A1P43005 AP001160.4-201ENST00000596971 382 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC1A1P43005 AC100847.1-201ENST00000611316 481 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 AP005212.4-201ENST00000614206 710 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
SLC1A1P43005 AP005019.3-201ENST00000620418 560 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 MIR6719-201ENST00000622428 87 ntBASIC4.59□□□□□ -1.67
SLC1A1P43005 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SLC1A1P43005 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SLC1A1P43005 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
SLC1A1P43005 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SLC1A1P43005 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
SLC1A1P43005 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC1A1P43005 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC1A1P43005 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC1A1P43005 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC1A1P43005 Z98755.1-201ENST00000407015 1384 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 OR4K15-201ENST00000305051 1216 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
SLC1A1P43005 AL512430.2-201ENST00000406786 339 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC1A1P43005 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC1A1P43005 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
SLC1A1P43005 AC013470.3-201ENST00000420252 1194 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC1A1P43005 USP9YP9-201ENST00000429406 715 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC1A1P43005 RPL7P33-201ENST00000444159 742 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 PTMAP3-201ENST00000447474 330 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 AC010469.1-201ENST00000463864 576 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 CCDC75P1-201ENST00000469247 791 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC1A1P43005 MYL12AP1-201ENST00000518490 515 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC1A1P43005 AC068790.7-201ENST00000602347 528 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 FAM25E-202ENST00000608562 189 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 AL031666.3-201ENST00000609320 1006 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC1A1P43005 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC1A1P43005 FP325313.1-201ENST00000638228 703 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SLC1A1P43005 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC1A1P43005 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC1A1P43005 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC1A1P43005 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
SLC1A1P43005 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SLC1A1P43005 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC1A1P43005 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms