Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HTTP42858 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HTTP42858 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HTTP42858 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HTTP42858 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
HTTP42858 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HTTP42858 RPS4XP12-201ENST00000461747 709 ntBASIC4.51□□□□□ -1.69
HTTP42858 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.51□□□□□ -1.69
HTTP42858 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HTTP42858 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HTTP42858 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
HTTP42858 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HTTP42858 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HTTP42858 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HTTP42858 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.5□□□□□ -1.69
HTTP42858 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.5□□□□□ -1.69
HTTP42858 AC018635.1-201ENST00000468292 1030 ntBASIC4.5□□□□□ -1.69
HTTP42858 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.5□□□□□ -1.69
HTTP42858 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.5□□□□□ -1.69
HTTP42858 AL137849.1-201ENST00000604767 169 ntBASIC4.5□□□□□ -1.69
HTTP42858 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HTTP42858 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HTTP42858 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HTTP42858 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HTTP42858 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HTTP42858 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.5□□□□□ -1.69
HTTP42858 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.5□□□□□ -1.69
HTTP42858 SOD2P1-201ENST00000396543 562 ntBASIC4.5□□□□□ -1.69
HTTP42858 MIR1179-201ENST00000408703 91 ntBASIC4.5□□□□□ -1.69
HTTP42858 AL049874.2-201ENST00000492636 288 ntBASIC4.5□□□□□ -1.69
HTTP42858 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.5□□□□□ -1.69
HTTP42858 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.5□□□□□ -1.69
HTTP42858 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HTTP42858 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.5□□□□□ -1.69
HTTP42858 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.5□□□□□ -1.69
HTTP42858 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HTTP42858 AL133383.2-201ENST00000622958 2336 ntBASIC4.5□□□□□ -1.69
HTTP42858 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.5□□□□□ -1.69
HTTP42858 MAPK10-372ENST00000641954 3413 ntBASIC4.5□□□□□ -1.69
HTTP42858 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HTTP42858 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.5□□□□□ -1.69
HTTP42858 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.5□□□□□ -1.69
HTTP42858 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HTTP42858 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HTTP42858 DDX39BP2-208ENST00000453923 258 ntBASIC4.5□□□□□ -1.69
HTTP42858 RN7SL271P-201ENST00000487601 295 ntBASIC4.5□□□□□ -1.69
HTTP42858 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.5□□□□□ -1.69
HTTP42858 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
HTTP42858 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HTTP42858 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
HTTP42858 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 TCEA1P2-201ENST00000420496 906 ntBASIC4.49□□□□□ -1.69
HTTP42858 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.49□□□□□ -1.69
HTTP42858 RPL38P1-201ENST00000460914 211 ntBASIC4.49□□□□□ -1.69
HTTP42858 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.49□□□□□ -1.69
HTTP42858 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC4.49□□□□□ -1.69
HTTP42858 MTCO3P22-201ENST00000603219 784 ntBASIC4.49□□□□□ -1.69
HTTP42858 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC4.49□□□□□ -1.69
HTTP42858 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HTTP42858 AP001284.1-201ENST00000528393 2118 ntBASIC4.49□□□□□ -1.69
HTTP42858 AP004289.2-201ENST00000444413 1457 ntBASIC4.49□□□□□ -1.69
HTTP42858 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 SNORA60-201ENST00000362396 134 ntBASIC4.49□□□□□ -1.69
HTTP42858 MIR921-201ENST00000401133 56 ntBASIC4.49□□□□□ -1.69
HTTP42858 RPL7P1-201ENST00000468161 747 ntBASIC4.49□□□□□ -1.69
HTTP42858 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.49□□□□□ -1.69
HTTP42858 AC091516.1-201ENST00000549191 703 ntBASIC4.49□□□□□ -1.69
HTTP42858 AL352979.3-201ENST00000553515 247 ntBASIC4.49□□□□□ -1.69
HTTP42858 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.49□□□□□ -1.69
HTTP42858 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.49□□□□□ -1.69
HTTP42858 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HTTP42858 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HTTP42858 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.48□□□□□ -1.69
HTTP42858 MARK2P15-201ENST00000432204 2186 ntBASIC4.48□□□□□ -1.69
HTTP42858 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HTTP42858 CEACAMP1-201ENST00000434624 1035 ntBASIC4.48□□□□□ -1.69
HTTP42858 AL133162.1-201ENST00000463228 453 ntBASIC4.48□□□□□ -1.69
HTTP42858 AC005726.1-201ENST00000494679 427 ntBASIC4.48□□□□□ -1.69
HTTP42858 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.48□□□□□ -1.69
HTTP42858 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.48□□□□□ -1.69
HTTP42858 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.48□□□□□ -1.69
HTTP42858 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HTTP42858 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HTTP42858 MTND4LP20-201ENST00000402379 270 ntBASIC4.48□□□□□ -1.69
HTTP42858 EIF1P3-201ENST00000423841 334 ntBASIC4.48□□□□□ -1.69
HTTP42858 AC005326.1-201ENST00000429197 123 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms