Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC105233.1-201ENST00000498840 781 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXD13P35453 AC016550.1-201ENST00000505348 785 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXD13P35453 AC133963.2-201ENST00000513686 578 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD13P35453 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXD13P35453 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXD13P35453 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXD13P35453 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD13P35453 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD13P35453 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXD13P35453 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXD13P35453 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXD13P35453 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD13P35453 AC092574.1-201ENST00000609771 420 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 MIR8084-201ENST00000614105 89 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD13P35453 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXD13P35453 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
HOXD13P35453 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
HOXD13P35453 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HOXD13P35453 AP001642.1-201ENST00000624727 2117 ntBASIC5.21□□□□□ -1.57
HOXD13P35453 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
HOXD13P35453 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXD13P35453 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HOXD13P35453 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXD13P35453 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
HOXD13P35453 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.57
HOXD13P35453 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXD13P35453 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXD13P35453 RNU6-796P-201ENST00000391086 107 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 RNU4-27P-201ENST00000410889 139 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 AL158050.1-201ENST00000416077 457 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD13P35453 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD13P35453 RPL36AP10-201ENST00000421785 322 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXD13P35453 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD13P35453 NPM1P22-201ENST00000427761 952 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 AC008072.1-201ENST00000434254 824 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 RPL7P29-201ENST00000437151 728 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXD13P35453 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXD13P35453 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD13P35453 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD13P35453 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXD13P35453 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXD13P35453 AC079168.2-201ENST00000453977 416 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXD13P35453 AC010285.3-201ENST00000511668 676 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXD13P35453 AL671862.1-201ENST00000515851 349 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD13P35453 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD13P35453 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD13P35453 AP001922.4-201ENST00000526967 290 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 BRD9P1-201ENST00000529855 560 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 BNIP3P1-201ENST00000547295 580 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXD13P35453 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXD13P35453 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXD13P35453 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXD13P35453 AC104229.1-201ENST00000561364 255 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD13P35453 AC233702.9-201ENST00000581528 203 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD13P35453 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HOXD13P35453 MIR4737-201ENST00000583979 81 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXD13P35453 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXD13P35453 AC005776.1-201ENST00000603164 290 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 AC243654.2-201ENST00000612843 443 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 U6.48-201ENST00000618523 106 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXD13P35453 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HOXD13P35453 AL442639.1-201ENST00000625030 1899 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXD13P35453 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXD13P35453 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXD13P35453 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXD13P35453 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXD13P35453 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXD13P35453 AC083843.3-201ENST00000623679 2186 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 AL445487.1-201ENST00000415694 1580 ntBASIC5.21□□□□□ -1.58
HOXD13P35453 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXD13P35453 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HOXD13P35453 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HOXD13P35453 AL137100.1-201ENST00000556703 1620 ntBASIC5.2□□□□□ -1.58
HOXD13P35453 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXD13P35453 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXD13P35453 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXD13P35453 RNU1-83P-201ENST00000363426 164 ntBASIC5.2□□□□□ -1.58
HOXD13P35453 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms