Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
ABCD3P28288 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.88□□□□□ -1.63
ABCD3P28288 PART1_2.1-201ENST00000612397 250 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.88□□□□□ -1.63
ABCD3P28288 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.88□□□□□ -1.63
ABCD3P28288 BNIP3P41-202ENST00000616656 861 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
ABCD3P28288 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.88□□□□□ -1.63
ABCD3P28288 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.88□□□□□ -1.63
ABCD3P28288 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.88□□□□□ -1.63
ABCD3P28288 FRG1EP-201ENST00000634469 770 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 OR52B5P-202ENST00000641118 1110 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AC104260.2-201ENST00000623551 3497 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.88□□□□□ -1.63
ABCD3P28288 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ABCD3P28288 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
ABCD3P28288 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ABCD3P28288 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
ABCD3P28288 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.87□□□□□ -1.63
ABCD3P28288 OR9G4-201ENST00000302957 984 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 RN7SKP74-201ENST00000362849 309 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 U3.2-201ENST00000362981 210 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 U3.7-201ENST00000363668 216 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ABCD3P28288 RNU6-171P-201ENST00000384354 107 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 RNU6-272P-201ENST00000411028 104 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 OR51A3P-201ENST00000413596 924 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 MTCO2P23-201ENST00000425216 680 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 RPL7AP49-201ENST00000429522 581 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 AL591438.1-201ENST00000433508 581 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 AC023347.2-201ENST00000433994 462 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.87□□□□□ -1.63
ABCD3P28288 AC245047.2-201ENST00000441060 530 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ABCD3P28288 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 RHEBP2-201ENST00000450289 600 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 PRDX3P4-201ENST00000470828 747 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 RN7SL30P-201ENST00000488416 306 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 RN7SL629P-201ENST00000489622 285 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 RPS4XP20-201ENST00000505751 772 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.87□□□□□ -1.63
ABCD3P28288 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.87□□□□□ -1.63
ABCD3P28288 RPL7L1P13-201ENST00000511702 739 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.87□□□□□ -1.63
ABCD3P28288 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.87□□□□□ -1.63
ABCD3P28288 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.87□□□□□ -1.63
ABCD3P28288 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.87□□□□□ -1.63
ABCD3P28288 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.87□□□□□ -1.63
ABCD3P28288 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.87□□□□□ -1.63
ABCD3P28288 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ABCD3P28288 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.87□□□□□ -1.63
ABCD3P28288 MTCYBP23-201ENST00000558717 1102 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 AC084757.1-201ENST00000559987 490 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.87□□□□□ -1.63
ABCD3P28288 AC027455.1-201ENST00000574104 594 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 MIR4666A-201ENST00000580160 79 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 MIR4512-201ENST00000583257 77 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ABCD3P28288 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
ABCD3P28288 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.87□□□□□ -1.63
ABCD3P28288 AP004247.3-201ENST00000608682 624 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 AC009163.6-201ENST00000612367 342 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 AL050303.3-201ENST00000613704 284 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 AC090527.3-201ENST00000619041 548 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
ABCD3P28288 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ABCD3P28288 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
ABCD3P28288 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ABCD3P28288 AC092747.4-201ENST00000620519 1861 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.87□□□□□ -1.63
ABCD3P28288 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ABCD3P28288 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ABCD3P28288 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ABCD3P28288 AC008079.2-201ENST00000623543 20396 ntBASIC4.87□□□□□ -1.63
ABCD3P28288 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.87□□□□□ -1.63
ABCD3P28288 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ABCD3P28288 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ABCD3P28288 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
ABCD3P28288 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.86□□□□□ -1.63
ABCD3P28288 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ABCD3P28288 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCD3P28288 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCD3P28288 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCD3P28288 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ABCD3P28288 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.86□□□□□ -1.63
ABCD3P28288 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
ABCD3P28288 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.86□□□□□ -1.63
ABCD3P28288 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCD3P28288 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
ABCD3P28288 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCD3P28288 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCD3P28288 RNU1-87P-201ENST00000363727 170 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms