Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AL356317.1-201ENST00000396110 1436 ntBASIC3.68□□□□□ -1.82
CXCL3P19876 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL3P19876 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 CPHL1P-201ENST00000461341 3407 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 AC007342.7-201ENST00000624610 2337 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.67□□□□□ -1.82
CXCL3P19876 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CXCL3P19876 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
CXCL3P19876 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CXCL3P19876 RNU6-984P-201ENST00000363236 109 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 RNA5SP455-201ENST00000365190 119 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL3P19876 MIR223-201ENST00000385204 110 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.67□□□□□ -1.82
CXCL3P19876 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL3P19876 AP000534.2-201ENST00000412729 568 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 AMD1P2-201ENST00000412936 992 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL3P19876 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL3P19876 RPL6P29-201ENST00000414863 865 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.67□□□□□ -1.82
CXCL3P19876 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.67□□□□□ -1.82
CXCL3P19876 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.67□□□□□ -1.82
CXCL3P19876 PA2G4P6-201ENST00000438325 1197 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL3P19876 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL3P19876 H2AFZP5-201ENST00000446960 382 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 RAB28P3-201ENST00000448325 597 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.67□□□□□ -1.82
CXCL3P19876 AC079841.1-201ENST00000481228 950 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 RN7SL101P-201ENST00000496350 279 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CXCL3P19876 NDUFB4P12-201ENST00000513465 390 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL3P19876 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL3P19876 IGLVIV-64-201ENST00000518581 301 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.67□□□□□ -1.82
CXCL3P19876 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 AC092490.3-201ENST00000545370 572 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CXCL3P19876 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.67□□□□□ -1.82
CXCL3P19876 OR11J2P-201ENST00000555298 907 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL3P19876 OR1F2P-201ENST00000570470 933 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL3P19876 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CXCL3P19876 AC010200.2-201ENST00000605098 235 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 GMCL1P2-201ENST00000605230 823 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 AC034236.3-201ENST00000605999 461 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 AP000864.1-201ENST00000609424 650 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 FAM27B-201ENST00000610601 213 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL3P19876 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL3P19876 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL3P19876 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL3P19876 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL3P19876 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL3P19876 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 AC022893.2-201ENST00000564832 3296 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.67□□□□□ -1.82
CXCL3P19876 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL3P19876 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL3P19876 Z73965.1-201ENST00000623412 2297 ntBASIC3.67□□□□□ -1.82
CXCL3P19876 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL3P19876 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL3P19876 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.66□□□□□ -1.82
CXCL3P19876 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
CXCL3P19876 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.66□□□□□ -1.82
CXCL3P19876 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL3P19876 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.66□□□□□ -1.82
CXCL3P19876 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL3P19876 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CXCL3P19876 PABPC1P6-201ENST00000445594 1829 ntBASIC3.66□□□□□ -1.82
CXCL3P19876 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.66□□□□□ -1.82
CXCL3P19876 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL3P19876 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL3P19876 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CXCL3P19876 SNORD66.1-201ENST00000391230 76 ntBASIC3.66□□□□□ -1.82
CXCL3P19876 GLULP6-201ENST00000399502 913 ntBASIC3.66□□□□□ -1.82
CXCL3P19876 AP000357.1-201ENST00000409926 1165 ntBASIC3.66□□□□□ -1.82
CXCL3P19876 RNU6-603P-201ENST00000411403 107 ntBASIC3.66□□□□□ -1.82
CXCL3P19876 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL3P19876 AC011742.1-201ENST00000431448 434 ntBASIC3.66□□□□□ -1.82
CXCL3P19876 AC097523.2-201ENST00000435551 652 ntBASIC3.66□□□□□ -1.82
CXCL3P19876 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.66□□□□□ -1.82
CXCL3P19876 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.66□□□□□ -1.82
CXCL3P19876 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL3P19876 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms