Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.18□□□□□ -1.42
SNRPA1P09661 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.18□□□□□ -1.42
SNRPA1P09661 RBPJP2-201ENST00000618187 1444 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNRPA1P09661 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
SNRPA1P09661 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNRPA1P09661 UBE2V1P9-201ENST00000414760 368 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.18□□□□□ -1.42
SNRPA1P09661 RPS27AP7-201ENST00000422792 455 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 AC009480.2-201ENST00000422916 432 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.18□□□□□ -1.42
SNRPA1P09661 MTCO1P43-201ENST00000431831 488 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 BX119904.1-201ENST00000432026 348 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 RPS17P8-201ENST00000434525 335 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 AL157884.3-201ENST00000448273 1184 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 AK3P4-201ENST00000504283 583 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.18□□□□□ -1.42
SNRPA1P09661 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.18□□□□□ -1.42
SNRPA1P09661 AC091868.1-201ENST00000508746 304 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.18□□□□□ -1.42
SNRPA1P09661 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.18□□□□□ -1.42
SNRPA1P09661 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.18□□□□□ -1.42
SNRPA1P09661 OR10V3P-201ENST00000525712 725 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.18□□□□□ -1.42
SNRPA1P09661 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.18□□□□□ -1.42
SNRPA1P09661 AC010735.1-201ENST00000567305 1026 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 AC145350.1-201ENST00000567426 208 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.18□□□□□ -1.42
SNRPA1P09661 AC124283.4-201ENST00000581815 456 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNRPA1P09661 RPL26P30-202ENST00000602923 645 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 AC093673.2-201ENST00000609674 331 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 AC231759.1-201ENST00000616455 597 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.18□□□□□ -1.42
SNRPA1P09661 TLK1P1-201ENST00000456760 2440 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNRPA1P09661 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 CASC19-260ENST00000641828 2001 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.18□□□□□ -1.42
SNRPA1P09661 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNRPA1P09661 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNRPA1P09661 AC005261.6-201ENST00000623072 1387 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.18□□□□□ -1.42
SNRPA1P09661 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNRPA1P09661 AL442639.1-201ENST00000625030 1899 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 AP001029.2-203ENST00000589795 4910 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNRPA1P09661 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNRPA1P09661 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
SNRPA1P09661 SNX18P3-202ENST00000565670 1750 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 KARSP3-201ENST00000571212 1504 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 SNORD113.2-201ENST00000364166 89 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 RNU6-906P-201ENST00000384700 70 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SNRPA1P09661 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.17□□□□□ -1.42
SNRPA1P09661 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC115285.1-201ENST00000424879 736 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC093422.3-201ENST00000428506 305 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.17□□□□□ -1.42
SNRPA1P09661 OR10R1P-201ENST00000441524 1141 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.17□□□□□ -1.42
SNRPA1P09661 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.17□□□□□ -1.42
SNRPA1P09661 OR52A4P-201ENST00000472867 958 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.17□□□□□ -1.42
SNRPA1P09661 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.17□□□□□ -1.42
SNRPA1P09661 HPRT1P1-201ENST00000509498 657 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.17□□□□□ -1.42
SNRPA1P09661 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.17□□□□□ -1.42
SNRPA1P09661 RNU1-6P-201ENST00000516290 144 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNRPA1P09661 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.17□□□□□ -1.42
SNRPA1P09661 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SNRPA1P09661 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC083865.1-201ENST00000636634 831 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.17□□□□□ -1.42
SNRPA1P09661 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SNRPA1P09661 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNRPA1P09661 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNRPA1P09661 AC011447.7-201ENST00000624228 1590 ntBASIC6.17□□□□□ -1.42
SNRPA1P09661 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.17□□□□□ -1.42
SNRPA1P09661 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNRPA1P09661 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNRPA1P09661 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.16□□□□□ -1.42
SNRPA1P09661 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNRPA1P09661 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms