Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ASNSP4-201ENST00000511103 447 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 RNA5SP230-201ENST00000517039 122 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 NPM1P6-201ENST00000521088 871 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC6P09630 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC6P09630 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC6P09630 AC084824.1-201ENST00000550917 1005 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AGGF1P9-201ENST00000561884 913 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AL049838.1-201ENST00000563647 981 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 MTATP6P24-201ENST00000576835 677 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 MIR1254-2-201ENST00000579553 63 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC6P09630 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC6P09630 ZNF92P2-201ENST00000600543 1059 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AC091057.3-201ENST00000602684 733 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC6P09630 AC005156.1-201ENST00000613371 573 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AC097460.3-201ENST00000623099 442 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AC099654.9-201ENST00000637055 678 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC6P09630 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXC6P09630 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC6P09630 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC6P09630 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC6P09630 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC6P09630 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXC6P09630 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC6P09630 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXC6P09630 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HOXC6P09630 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC6P09630 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HOXC6P09630 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC6P09630 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HOXC6P09630 SNORA71.2-201ENST00000364941 134 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXC6P09630 RN7SKP263-201ENST00000411194 309 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 SSR1P2-201ENST00000415208 787 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HOXC6P09630 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC6P09630 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC6P09630 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC6P09630 RPS27AP12-201ENST00000429552 465 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC6P09630 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC6P09630 FHP1-201ENST00000442741 703 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC6P09630 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 OR52Y1P-201ENST00000452418 828 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC6P09630 RN7SL303P-201ENST00000469773 251 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 RPS3AP6-201ENST00000484430 795 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 AC025164.1-201ENST00000496249 478 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC6P09630 AC105031.1-201ENST00000518550 476 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC6P09630 OR7E10P-201ENST00000526420 991 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC6P09630 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC6P09630 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC6P09630 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC6P09630 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC6P09630 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC6P09630 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC6P09630 AC127024.5-201ENST00000580085 462 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 VN1R81P-201ENST00000602085 372 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 AL121652.1-201ENST00000608851 448 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 AC245389.2-201ENST00000616023 576 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 AC140725.3-201ENST00000616193 880 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 AC242843.1-201ENST00000618702 573 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HOXC6P09630 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC6P09630 AL731566.1-201ENST00000620490 1937 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC6P09630 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC6P09630 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC6P09630 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC6P09630 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC6P09630 AC116158.1-201ENST00000560231 2129 ntBASIC5.32□□□□□ -1.56
HOXC6P09630 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HOXC6P09630 AC011755.1-201ENST00000623763 2049 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 CASC19-255ENST00000641733 1385 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC6P09630 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC6P09630 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC6P09630 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC6P09630 AC021146.4-201ENST00000309229 279 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 AC017079.1-201ENST00000333650 415 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 MIR421-201ENST00000365696 85 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC6P09630 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC6P09630 KCTD10P1-201ENST00000434203 625 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 AC004854.1-201ENST00000440356 349 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 AC239367.2-201ENST00000447309 705 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC6P09630 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC6P09630 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC6P09630 AC091153.1-201ENST00000466297 402 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 SNRPCP3-201ENST00000474888 476 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 SUMO2P4-201ENST00000504193 276 ntBASIC5.31□□□□□ -1.56
HOXC6P09630 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms