Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 OR6K3-202ENST00000368146 996 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.38□□□□□ -1.71
MT-ND1P03886 MIR921-201ENST00000401133 56 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 GTF2IP5-201ENST00000414608 731 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AC073136.2-201ENST00000417282 849 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 LINC00993-201ENST00000420453 540 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AC073464.3-201ENST00000422564 712 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AL645608.4-201ENST00000423619 154 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AL353718.1-201ENST00000451028 517 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.38□□□□□ -1.71
MT-ND1P03886 RPL7AP28-201ENST00000464513 571 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 RPL23AP12-201ENST00000467573 473 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 RN7SL41P-201ENST00000476144 297 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.38□□□□□ -1.71
MT-ND1P03886 RNA5SP446-201ENST00000515955 82 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 RNU6-1004P-201ENST00000516584 111 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 RN7SKP66-201ENST00000516681 231 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 RNU6-889P-201ENST00000517189 103 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AC068446.3-201ENST00000555285 382 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AL049870.4-201ENST00000555741 486 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AC023158.1-201ENST00000561632 1025 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 MIR4489-201ENST00000578869 62 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AP001521.2-201ENST00000608772 546 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AC009163.6-201ENST00000612367 342 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 AC139769.3-201ENST00000618383 175 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AC009704.2-201ENST00000618739 483 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 CR381572.2-201ENST00000624852 397 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AC055839.1-201ENST00000634467 498 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.38□□□□□ -1.71
MT-ND1P03886 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.38□□□□□ -1.71
MT-ND1P03886 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.38□□□□□ -1.71
MT-ND1P03886 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MT-ND1P03886 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.38□□□□□ -1.71
MT-ND1P03886 CYP1D1P-201ENST00000416662 1433 ntBASIC4.38□□□□□ -1.71
MT-ND1P03886 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
MT-ND1P03886 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
MT-ND1P03886 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
MT-ND1P03886 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MT-ND1P03886 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
MT-ND1P03886 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
MT-ND1P03886 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.37□□□□□ -1.71
MT-ND1P03886 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MT-ND1P03886 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.37□□□□□ -1.71
MT-ND1P03886 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MT-ND1P03886 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
MT-ND1P03886 RN7SKP273-201ENST00000411392 314 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MT-ND1P03886 PDSS1P1-201ENST00000422953 1114 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 RPL21P43-201ENST00000425440 472 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.37□□□□□ -1.71
MT-ND1P03886 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.37□□□□□ -1.71
MT-ND1P03886 RPL12P28-201ENST00000430852 489 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 MTND6P6-201ENST00000478031 263 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 AC109462.1-201ENST00000491087 368 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 AC140172.1-201ENST00000502928 141 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.37□□□□□ -1.71
MT-ND1P03886 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.37□□□□□ -1.71
MT-ND1P03886 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.37□□□□□ -1.71
MT-ND1P03886 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.37□□□□□ -1.71
MT-ND1P03886 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.37□□□□□ -1.71
MT-ND1P03886 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.37□□□□□ -1.71
MT-ND1P03886 AC011453.2-201ENST00000603737 729 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 AC012557.1-201ENST00000607115 611 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.37□□□□□ -1.71
MT-ND1P03886 SNX18P1Y-201ENST00000616231 511 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.37□□□□□ -1.71
MT-ND1P03886 AP006248.3-201ENST00000623580 594 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 AP002371.2-201ENST00000624450 503 ntBASIC4.37□□□□□ -1.71
MT-ND1P03886 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
MT-ND1P03886 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MT-ND1P03886 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
MT-ND1P03886 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
MT-ND1P03886 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
MT-ND1P03886 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MT-ND1P03886 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
MT-ND1P03886 U8.4-201ENST00000363626 134 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 RNA5SP151-201ENST00000365632 117 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 RNU1-106P-201ENST00000384382 164 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AL590762.2-201ENST00000395798 571 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AL589647.1-201ENST00000402485 466 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 RPS27AP11-201ENST00000402798 447 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms