Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA1P02708 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA1P02708 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CHRNA1P02708 AL121657.1-201ENST00000327215 531 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA1P02708 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.96□□□□□ -1.62
CHRNA1P02708 RNU6-386P-201ENST00000362650 107 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 SNORA70C-201ENST00000384538 135 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA1P02708 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA1P02708 AL359643.1-201ENST00000404109 423 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AMZ2P2-201ENST00000406819 1057 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AL691447.1-201ENST00000419456 387 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.96□□□□□ -1.62
CHRNA1P02708 PHBP16-201ENST00000446318 950 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.96□□□□□ -1.62
CHRNA1P02708 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.96□□□□□ -1.62
CHRNA1P02708 RPL7P32-201ENST00000457119 744 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.96□□□□□ -1.62
CHRNA1P02708 AC022336.1-201ENST00000475510 337 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AC105137.1-201ENST00000484355 562 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AC026402.1-201ENST00000513642 170 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.96□□□□□ -1.62
CHRNA1P02708 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.96□□□□□ -1.62
CHRNA1P02708 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA1P02708 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
CHRNA1P02708 EIF1AXP2-201ENST00000555940 413 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.96□□□□□ -1.62
CHRNA1P02708 AC021483.2-201ENST00000567415 758 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 RN7SL435P-201ENST00000584418 282 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA1P02708 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.96□□□□□ -1.62
CHRNA1P02708 AL109618.2-201ENST00000605527 211 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.96□□□□□ -1.62
CHRNA1P02708 AC091979.2-201ENST00000607514 214 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AC020634.1-201ENST00000608701 549 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.96□□□□□ -1.62
CHRNA1P02708 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA1P02708 AC015813.6-201ENST00000624409 5808 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA1P02708 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA1P02708 Z95331.1-201ENST00000623075 23112 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 AC008079.2-201ENST00000623543 20396 ntBASIC4.96□□□□□ -1.62
CHRNA1P02708 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA1P02708 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA1P02708 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA1P02708 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA1P02708 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA1P02708 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.95□□□□□ -1.62
CHRNA1P02708 CPHL1P-201ENST00000461341 3407 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA1P02708 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA1P02708 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CHRNA1P02708 RNA5SP28-201ENST00000363841 119 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CHRNA1P02708 NCSTNP1-201ENST00000406229 144 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.95□□□□□ -1.62
CHRNA1P02708 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.95□□□□□ -1.62
CHRNA1P02708 SNRPFP1-201ENST00000414761 252 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.95□□□□□ -1.62
CHRNA1P02708 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.95□□□□□ -1.62
CHRNA1P02708 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.95□□□□□ -1.62
CHRNA1P02708 AC073136.2-201ENST00000417282 849 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.95□□□□□ -1.62
CHRNA1P02708 AC012519.1-201ENST00000424588 610 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 CKS1BP6-201ENST00000424932 240 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.95□□□□□ -1.62
CHRNA1P02708 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.95□□□□□ -1.62
CHRNA1P02708 AC011998.1-201ENST00000433403 117 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 RPS3AP54-201ENST00000435535 734 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 RAB28P3-201ENST00000448325 597 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 MTCO1P35-201ENST00000515270 228 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 RNA5SP249-201ENST00000516127 99 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 SNORA31.9-201ENST00000516429 84 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.95□□□□□ -1.62
CHRNA1P02708 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.95□□□□□ -1.62
CHRNA1P02708 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.95□□□□□ -1.62
CHRNA1P02708 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA1P02708 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.95□□□□□ -1.62
CHRNA1P02708 GMCL1P2-201ENST00000605230 823 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 AL135786.2-201ENST00000608422 615 ntBASIC4.95□□□□□ -1.62
CHRNA1P02708 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.95□□□□□ -1.62
CHRNA1P02708 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.95□□□□□ -1.62
CHRNA1P02708 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
CHRNA1P02708 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA1P02708 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA1P02708 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA1P02708 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CHRNA1P02708 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.94□□□□□ -1.62
CHRNA1P02708 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
CHRNA1P02708 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA1P02708 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA1P02708 AC083843.3-201ENST00000623679 2186 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA1P02708 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHRNA1P02708 AC008033.1-201ENST00000216407 1162 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 OR5P1P-201ENST00000299512 925 ntBASIC4.94□□□□□ -1.62
CHRNA1P02708 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHRNA1P02708 RNA5SP366-201ENST00000365454 123 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms