Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTDNEP1O95476 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTDNEP1O95476 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTDNEP1O95476 FAM3C2-201ENST00000312214 681 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC126755.2-208ENST00000327792 462 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC138969.1-213ENST00000331436 462 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 RNA5SP388-201ENST00000362584 119 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 RNU1-32P-201ENST00000363937 159 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTDNEP1O95476 AP000357.1-201ENST00000409926 1165 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC245028.1-201ENST00000423259 256 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC023141.6-201ENST00000429418 337 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC006517.1-201ENST00000480485 328 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC063950.1-201ENST00000552036 308 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC012603.1-201ENST00000606424 528 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC114781.5-201ENST00000615297 108 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC095038.2-201ENST00000621464 1070 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 AP000843.1-201ENST00000624880 701 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 AC016588.2-201ENST00000632484 3021 ntBASIC4.87□□□□□ -1.63
CTDNEP1O95476 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 AL022322.2-201ENST00000624072 20397 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 AC011266.1-201ENST00000624119 3569 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTDNEP1O95476 AC068254.2-201ENST00000623938 3577 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 AL607077.1-201ENST00000401718 499 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 MIR1179-201ENST00000408703 91 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 RNA5SP296-201ENST00000410523 111 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 RNU2-22P-201ENST00000411266 212 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 AL160275.2-201ENST00000412010 394 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 TXNP2-201ENST00000443918 295 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 EIF2S2P2-201ENST00000447161 982 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTDNEP1O95476 RPL5P16-201ENST00000471467 790 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 AF213884.1-201ENST00000488102 463 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 KRT19P6-201ENST00000510983 209 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 HMGB1P19-201ENST00000517578 577 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 CDH12P4-201ENST00000517835 295 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 CDH12P3-201ENST00000517935 295 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 CDH12P1-201ENST00000518435 295 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 MTND1P6-201ENST00000523621 946 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 PSMB7P1-201ENST00000556349 514 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 DPRXP4-201ENST00000578053 568 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTDNEP1O95476 AC008536.1-201ENST00000602872 669 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.86□□□□□ -1.63
CTDNEP1O95476 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTDNEP1O95476 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTDNEP1O95476 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTDNEP1O95476 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CTDNEP1O95476 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTDNEP1O95476 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTDNEP1O95476 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTDNEP1O95476 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTDNEP1O95476 ZNF962P-201ENST00000443465 3140 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTDNEP1O95476 RNA5SP366-201ENST00000365454 123 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 SNORA56-201ENST00000383966 129 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 MIR93-201ENST00000385024 80 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 RNU4-25P-201ENST00000410569 230 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 RPL37P18-201ENST00000411602 243 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 PARP4P3-201ENST00000510265 317 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.85□□□□□ -1.63
CTDNEP1O95476 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.85□□□□□ -1.63
CTDNEP1O95476 SETP1-201ENST00000556014 845 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms