Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 KATNBL1P4-201ENST00000503545 918 ntBASIC4.07□□□□□ -1.76
SGCEO43556 AC018797.3-201ENST00000513388 1241 ntBASIC4.07□□□□□ -1.76
SGCEO43556 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.07□□□□□ -1.76
SGCEO43556 NPM1P35-201ENST00000533043 868 ntBASIC4.07□□□□□ -1.76
SGCEO43556 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.07□□□□□ -1.76
SGCEO43556 UBE2FP2-201ENST00000566646 462 ntBASIC4.07□□□□□ -1.76
SGCEO43556 AC015912.2-201ENST00000571053 181 ntBASIC4.07□□□□□ -1.76
SGCEO43556 AC091042.1-201ENST00000579213 173 ntBASIC4.07□□□□□ -1.76
SGCEO43556 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.07□□□□□ -1.76
SGCEO43556 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.07□□□□□ -1.76
SGCEO43556 AC019131.2-201ENST00000609071 870 ntBASIC4.07□□□□□ -1.76
SGCEO43556 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SGCEO43556 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SGCEO43556 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.07□□□□□ -1.76
SGCEO43556 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.07□□□□□ -1.76
SGCEO43556 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SGCEO43556 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SGCEO43556 AC006971.1-201ENST00000407916 4486 ntBASIC4.06□□□□□ -1.76
SGCEO43556 AL133412.1-201ENST00000380194 2992 ntBASIC4.06□□□□□ -1.76
SGCEO43556 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SGCEO43556 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SGCEO43556 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SGCEO43556 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SGCEO43556 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
SGCEO43556 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SGCEO43556 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SGCEO43556 SNORA71.2-201ENST00000364941 134 ntBASIC4.06□□□□□ -1.76
SGCEO43556 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SGCEO43556 CEACAMP8-201ENST00000413902 580 ntBASIC4.06□□□□□ -1.76
SGCEO43556 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.06□□□□□ -1.76
SGCEO43556 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.06□□□□□ -1.76
SGCEO43556 AC006455.6-201ENST00000426192 893 ntBASIC4.06□□□□□ -1.76
SGCEO43556 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.06□□□□□ -1.76
SGCEO43556 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.06□□□□□ -1.76
SGCEO43556 AC008072.1-201ENST00000434254 824 ntBASIC4.06□□□□□ -1.76
SGCEO43556 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.06□□□□□ -1.76
SGCEO43556 RPL36AP41-201ENST00000493820 306 ntBASIC4.06□□□□□ -1.76
SGCEO43556 RPS4XP18-201ENST00000495480 763 ntBASIC4.06□□□□□ -1.76
SGCEO43556 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.06□□□□□ -1.76
SGCEO43556 NDUFA5P12-201ENST00000503796 343 ntBASIC4.06□□□□□ -1.76
SGCEO43556 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.06□□□□□ -1.76
SGCEO43556 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.06□□□□□ -1.76
SGCEO43556 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.06□□□□□ -1.76
SGCEO43556 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.06□□□□□ -1.76
SGCEO43556 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.06□□□□□ -1.76
SGCEO43556 MIR4436B2-201ENST00000581415 91 ntBASIC4.06□□□□□ -1.76
SGCEO43556 MIR4436B1-201ENST00000583272 91 ntBASIC4.06□□□□□ -1.76
SGCEO43556 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.06□□□□□ -1.76
SGCEO43556 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.06□□□□□ -1.76
SGCEO43556 AC098935.2-201ENST00000604222 466 ntBASIC4.06□□□□□ -1.76
SGCEO43556 AL021707.7-201ENST00000607991 416 ntBASIC4.06□□□□□ -1.76
SGCEO43556 AC007620.3-201ENST00000608131 497 ntBASIC4.06□□□□□ -1.76
SGCEO43556 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.06□□□□□ -1.76
SGCEO43556 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SGCEO43556 CASC19-284ENST00000642142 1868 ntBASIC4.06□□□□□ -1.76
SGCEO43556 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SGCEO43556 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.06□□□□□ -1.76
SGCEO43556 AC007342.7-201ENST00000624610 2337 ntBASIC4.06□□□□□ -1.76
SGCEO43556 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SGCEO43556 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
SGCEO43556 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SGCEO43556 AC108467.2-201ENST00000617640 1597 ntBASIC4.06□□□□□ -1.76
SGCEO43556 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.05□□□□□ -1.76
SGCEO43556 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SGCEO43556 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.05□□□□□ -1.76
SGCEO43556 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SGCEO43556 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 RNU6-146P-201ENST00000384602 108 ntBASIC4.05□□□□□ -1.76
SGCEO43556 MIR921-201ENST00000401133 56 ntBASIC4.05□□□□□ -1.76
SGCEO43556 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.05□□□□□ -1.76
SGCEO43556 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.05□□□□□ -1.76
SGCEO43556 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 RPL21P43-201ENST00000425440 472 ntBASIC4.05□□□□□ -1.76
SGCEO43556 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.05□□□□□ -1.76
SGCEO43556 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.05□□□□□ -1.76
SGCEO43556 AC092013.1-201ENST00000438795 332 ntBASIC4.05□□□□□ -1.76
SGCEO43556 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.05□□□□□ -1.76
SGCEO43556 AL451050.1-201ENST00000450126 415 ntBASIC4.05□□□□□ -1.76
SGCEO43556 MTCYBP14-201ENST00000457471 715 ntBASIC4.05□□□□□ -1.76
SGCEO43556 PPIAP21-201ENST00000464473 501 ntBASIC4.05□□□□□ -1.76
SGCEO43556 AC092324.1-201ENST00000468671 324 ntBASIC4.05□□□□□ -1.76
SGCEO43556 AC104763.1-201ENST00000475274 360 ntBASIC4.05□□□□□ -1.76
SGCEO43556 AC025445.1-201ENST00000502728 300 ntBASIC4.05□□□□□ -1.76
SGCEO43556 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.05□□□□□ -1.76
SGCEO43556 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.05□□□□□ -1.76
SGCEO43556 AC090515.3-201ENST00000560431 315 ntBASIC4.05□□□□□ -1.76
SGCEO43556 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.05□□□□□ -1.76
SGCEO43556 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.05□□□□□ -1.76
SGCEO43556 HMGB2P1-201ENST00000591146 634 ntBASIC4.05□□□□□ -1.76
SGCEO43556 AC034236.3-201ENST00000605999 461 ntBASIC4.05□□□□□ -1.76
SGCEO43556 AC020634.1-201ENST00000608701 549 ntBASIC4.05□□□□□ -1.76
SGCEO43556 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms