Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PDLIM1O00151 RNA5SP305-201ENST00000362665 119 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM1O00151 AL133412.1-201ENST00000380194 2992 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 MIR921-201ENST00000401133 56 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 AL078604.1-201ENST00000404609 466 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 MIR1183-201ENST00000408856 89 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 RNU2-50P-201ENST00000410494 143 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 RN7SKP213-201ENST00000410746 298 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM1O00151 LINC00993-201ENST00000420453 540 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 DDX39BP1-205ENST00000422507 192 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM1O00151 FAM204CP-201ENST00000424489 642 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 RPL23AP4-201ENST00000427757 463 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM1O00151 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.53□□□□□ -1.68
PDLIM1O00151 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM1O00151 VN1R48P-201ENST00000448149 1036 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 TCEA1P1-201ENST00000449716 880 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.53□□□□□ -1.68
PDLIM1O00151 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM1O00151 RPSAP50-201ENST00000481955 852 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 AC109462.1-201ENST00000491087 368 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.53□□□□□ -1.68
PDLIM1O00151 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM1O00151 AC092490.3-201ENST00000545370 572 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 AL360157.1-201ENST00000565962 87 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 AC009101.1-201ENST00000568135 242 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.53□□□□□ -1.68
PDLIM1O00151 AC015911.5-201ENST00000587076 451 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.53□□□□□ -1.68
PDLIM1O00151 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM1O00151 AC020914.4-201ENST00000597690 277 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 SNX6P1-201ENST00000601728 1224 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM1O00151 AC019131.2-201ENST00000609071 870 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 OR6R2P-201ENST00000609216 300 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 AC021106.3-201ENST00000623925 531 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM1O00151 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM1O00151 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM1O00151 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM1O00151 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM1O00151 AC083899.2-201ENST00000423285 1376 ntBASIC4.53□□□□□ -1.69
PDLIM1O00151 FAM35DP-201ENST00000323387 2712 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM1O00151 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PDLIM1O00151 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.52□□□□□ -1.69
PDLIM1O00151 THAP12P4-201ENST00000528321 2266 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM1O00151 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM1O00151 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PDLIM1O00151 RN7SKP44-201ENST00000363602 316 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 SNORA27.3-201ENST00000364937 134 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 AL080315.1-201ENST00000406055 466 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 RN7SKP114-201ENST00000410327 279 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM1O00151 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.52□□□□□ -1.69
PDLIM1O00151 MTND2P2-201ENST00000434633 945 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.52□□□□□ -1.69
PDLIM1O00151 AL354710.1-201ENST00000453641 246 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 TPRKBP1-201ENST00000456243 481 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 AC037198.2-201ENST00000478845 733 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM1O00151 OR5M14P-201ENST00000506803 618 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 AC020593.1-201ENST00000507399 299 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 FABP5P6-201ENST00000510588 409 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 AC008694.2-201ENST00000517591 306 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM1O00151 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM1O00151 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PDLIM1O00151 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.52□□□□□ -1.69
PDLIM1O00151 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM1O00151 MIMT1-201ENST00000597105 1050 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 AL445222.1-201ENST00000607259 628 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM1O00151 AC009163.6-201ENST00000612367 342 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 uc_338.32-201ENST00000615087 172 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 AL356274.1-201ENST00000617064 410 ntBASIC4.52□□□□□ -1.69
PDLIM1O00151 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.52□□□□□ -1.69
PDLIM1O00151 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.52□□□□□ -1.69
PDLIM1O00151 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.52□□□□□ -1.69
PDLIM1O00151 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM1O00151 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PDLIM1O00151 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.52□□□□□ -1.69
PDLIM1O00151 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
PDLIM1O00151 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM1O00151 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM1O00151 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PDLIM1O00151 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM1O00151 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.51□□□□□ -1.69
PDLIM1O00151 AL645927.1-201ENST00000396783 406 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 GSTA12P-201ENST00000402398 508 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.51□□□□□ -1.69
PDLIM1O00151 OR2AM1P-201ENST00000422137 422 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC234779.1-201ENST00000425910 285 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms