Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 RNU1-44P-201ENST00000384453 163 ntBASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 AL356968.2-201ENST00000412769 1257 ntBASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 COX6B1P7-201ENST00000430845 235 ntBASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 ARL4AP1-201ENST00000503220 705 ntBASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 SNORA67.7-201ENST00000516664 135 ntBASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 AL352979.3-201ENST00000553515 247 ntBASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 AC027455.1-201ENST00000574104 594 ntBASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144AA2RUR9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 AL133243.3-201ENST00000617415 3004 ntBASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 RNA5SP73-201ENST00000516744 108 ntBASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 RNA5SP143-201ENST00000516936 115 ntBASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 AC105233.3-201ENST00000531125 744 ntBASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 AC053481.3-201ENST00000577881 843 ntBASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 AC016839.1-201ENST00000578162 867 ntBASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 MIR3158-1-201ENST00000583596 81 ntBASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 Z95331.1-201ENST00000623075 23112 ntBASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC144AA2RUR9 SMG1P4-204ENST00000523028 4131 ntBASIC6.21□□□□□ -1.41
CCDC144AA2RUR9 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.21□□□□□ -1.41
CCDC144AA2RUR9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.21□□□□□ -1.41
CCDC144AA2RUR9 AP001273.1-201ENST00000624493 3152 ntBASIC6.21□□□□□ -1.41
CCDC144AA2RUR9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 SETP15-201ENST00000412724 337 ntBASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 RNA5SP246-201ENST00000458909 119 ntBASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 NPM1P29-201ENST00000483112 803 ntBASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 AC099522.1-202ENST00000514718 367 ntBASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 MIR4444-1-201ENST00000581696 74 ntBASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 MIR4444-2-201ENST00000584390 74 ntBASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 CASC19-204ENST00000641001 2055 ntBASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC144AA2RUR9 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 AP001157.1-201ENST00000550837 2339 ntBASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 VPS35P1-201ENST00000563400 1518 ntBASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 SETP1-201ENST00000556014 845 ntBASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 AL353726.1-201ENST00000614041 1000 ntBASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 AC112200.1-201ENST00000625015 234 ntBASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 AL672167.1-203ENST00000641299 2975 ntBASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144AA2RUR9 MIR372-201ENST00000362225 67 ntBASIC6.19□□□□□ -1.42
CCDC144AA2RUR9 SNORA70.4-201ENST00000365509 134 ntBASIC6.19□□□□□ -1.42
CCDC144AA2RUR9 AL078604.1-201ENST00000404609 466 ntBASIC6.19□□□□□ -1.42
CCDC144AA2RUR9 RNU6-628P-201ENST00000410675 107 ntBASIC6.19□□□□□ -1.42
CCDC144AA2RUR9 MIR1911-201ENST00000410783 80 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms