Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 IGLVIV-64-201ENST00000518581 301 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 HMGN2P47-201ENST00000559378 272 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AC005899.7-201ENST00000618199 588 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AL022401.1-201ENST00000619498 108 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AC145207.9-201ENST00000623802 325 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AC019226.2-201ENST00000625973 424 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AC017104.5-201ENST00000637647 639 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AL672167.1-203ENST00000641299 2975 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 HSPA8P14-201ENST00000552265 1805 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 RNU6-171P-201ENST00000384354 107 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 SNORA66-201ENST00000384792 133 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 RNU4-22P-201ENST00000411058 166 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 ZDHHC20P1-204ENST00000435787 423 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 CYCSP11-201ENST00000436426 315 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC092170.1-201ENST00000440211 356 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AL163193.1-201ENST00000444895 788 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC004022.1-201ENST00000447766 1066 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 COPS8P2-201ENST00000473228 627 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 RN7SL222P-201ENST00000476452 299 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 OR2AO1P-201ENST00000476497 403 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 MTCYBP35-201ENST00000503630 1137 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 BOLA3P3-201ENST00000505182 232 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 MRPS33P2-201ENST00000507850 322 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 OR8A2P-201ENST00000528631 952 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC025260.1-201ENST00000548858 430 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC087477.6-201ENST00000559595 843 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC010487.1-201ENST00000594408 1172 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AL138478.1-201ENST00000612252 832 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 MIR8069-1-201ENST00000616627 86 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 STMN1P1-201ENST00000617809 440 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AL355493.4-201ENST00000618530 292 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AL121895.2-201ENST00000619558 447 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC022106.2-201ENST00000620114 757 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 MIR8069-2-201ENST00000621412 86 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC138907.10-201ENST00000623708 983 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC090897.3-201ENST00000636973 1157 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 AC073055.1-201ENST00000456901 1621 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 PABPC1P6-201ENST00000445594 1829 ntBASIC5□□□□□ -1.61
TCRBV7S3A2A0A539 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 AC093311.1-201ENST00000506586 2021 ntBASIC4.99□□□□□ -1.61
TCRBV7S3A2A0A539 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms