Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 SNORA70.6-201ENST00000383934 134 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 RNU6-1242P-201ENST00000391052 103 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AL355433.1-201ENST00000422804 300 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 NDUFB4P8-201ENST00000435351 367 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC073465.2-201ENST00000440938 498 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 RPL23AP15-201ENST00000450202 459 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 PNPLA4P1-201ENST00000458328 305 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 CCDC75P1-201ENST00000469247 791 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 UBA52P7-201ENST00000486088 380 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 UBA52P3-201ENST00000491303 382 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC114322.1-201ENST00000506771 926 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC112673.1-201ENST00000513168 575 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC009097.3-201ENST00000563557 1018 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AGGF1P6-201ENST00000569213 976 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC022662.1-201ENST00000580252 331 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC061975.8-201ENST00000587058 721 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC000068.2-201ENST00000608816 460 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 CASC19-264ENST00000641912 1184 ntBASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL4A3BPQ9Y5P4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 XPOTP1-201ENST00000443317 2398 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 MIR1178-201ENST00000408396 91 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 KRR1P1-201ENST00000419430 803 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC092447.3-201ENST00000426027 686 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 RPS27AP6-201ENST00000427962 448 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 COPS8P2-201ENST00000473228 627 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC021106.1-201ENST00000509020 1058 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 MTCO2P15-201ENST00000532655 656 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 OR4U1P-201ENST00000554958 912 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC069366.1-201ENST00000583159 838 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC245036.5-201ENST00000596330 847 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC009237.13-201ENST00000603193 276 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC079395.3-201ENST00000615161 484 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC021755.4-201ENST00000616620 456 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 MIR6837-201ENST00000620884 64 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 AC022509.4-201ENST00000621404 572 ntBASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL4A3BPQ9Y5P4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC235565.1-201ENST00000456962 1325 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC114546.3-201ENST00000623582 1734 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms