Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AL603750.1-201ENST00000624216 1717 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 TCP11X1-202ENST00000622971 1372 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 BMS1P3-201ENST00000372011 932 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 SNORA5.1-201ENST00000384275 131 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 RNU6-1151P-201ENST00000384684 107 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AL161909.1-201ENST00000397390 712 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 RSL24D1P4-201ENST00000400938 484 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 MRPL53P1-201ENST00000414323 319 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC019050.1-201ENST00000418508 492 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 RPS4XP5-201ENST00000419038 768 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC098592.1-201ENST00000419352 333 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 RPL7P44-201ENST00000424827 742 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 RPS26P40-201ENST00000435209 294 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 SPRYD7P1-201ENST00000443861 570 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 RSL24D1P3-201ENST00000449255 495 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC243772.1-201ENST00000451620 410 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC022215.1-201ENST00000481770 362 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC109464.1-201ENST00000511091 819 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC010587.2-201ENST00000511727 448 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 OR5BM1P-201ENST00000512021 366 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 MTCO3P28-201ENST00000513351 515 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 EIF3KP3-201ENST00000514461 639 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC008494.2-201ENST00000514544 370 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AP001189.2-201ENST00000527320 189 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 HSPE1P2-201ENST00000554777 306 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC016180.1-201ENST00000567945 403 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 MIR132-201ENST00000591554 101 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC106791.2-201ENST00000604680 391 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC096553.1-201ENST00000605169 829 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 SDR42E1P1-201ENST00000611327 477 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AL392048.1-201ENST00000613946 534 ntBASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA3Q9Y5H0 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC019072.1-201ENST00000604535 1551 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 RNA5SP211-201ENST00000365516 117 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 MIR105-2-201ENST00000385083 81 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 RNU6-757P-201ENST00000410334 100 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 MYL6P5-201ENST00000412707 459 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 PTP4A1P5-201ENST00000420305 455 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AL662874.1-201ENST00000426065 230 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AL359265.1-201ENST00000440296 795 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 NPM1P39-201ENST00000449818 867 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC108693.1-201ENST00000496068 432 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC104090.1-201ENST00000506341 1171 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC109481.1-201ENST00000509173 282 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 FTH1P11-201ENST00000517577 551 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 IGLV2-28-201ENST00000520681 304 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms