Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PCDHGC4Q9Y5F7 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHGC4Q9Y5F7 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGC4Q9Y5F7 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGC4Q9Y5F7 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGC4Q9Y5F7 AL591848.4-201ENST00000567832 3472 ntBASIC6.73□□□□□ -1.33
PCDHGC4Q9Y5F7 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGC4Q9Y5F7 AC105114.1-201ENST00000624795 1862 ntBASIC6.73□□□□□ -1.33
PCDHGC4Q9Y5F7 MKI67P1-201ENST00000604297 1460 ntBASIC6.73□□□□□ -1.33
PCDHGC4Q9Y5F7 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGC4Q9Y5F7 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 CASC19-260ENST00000641828 2001 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC007485.2-201ENST00000623493 1667 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC010894.1-201ENST00000313760 361 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC005294.1-201ENST00000355509 281 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 RNU1-24P-201ENST00000364285 165 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 RNU6-74P-201ENST00000384235 107 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 RNU6-43P-201ENST00000384302 107 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AL356057.3-201ENST00000402607 340 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 MRPL50P2-201ENST00000416821 482 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 NPM1P18-201ENST00000434232 732 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 LSM1P1-201ENST00000438629 273 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 CBX1P1-201ENST00000440184 427 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 MTCO1P42-201ENST00000457379 726 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 Y_RNA.639-201ENST00000458981 102 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 MEMO1P3-201ENST00000459811 302 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC063943.1-201ENST00000465434 453 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 RN7SL83P-201ENST00000468131 297 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC017015.1-201ENST00000477387 286 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AL163540.1-201ENST00000485382 386 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC093677.1-201ENST00000514414 678 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 Y_RNA.711-201ENST00000516993 102 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC107953.1-201ENST00000522216 297 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC023050.3-201ENST00000541142 333 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 NANOGNBP2-201ENST00000544753 553 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC015818.6-201ENST00000584274 634 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 RPL7AP69-201ENST00000595306 806 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC011497.2-201ENST00000600255 639 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 7SK.7-201ENST00000603504 247 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AL133338.2-201ENST00000604292 736 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC016925.2-201ENST00000605108 242 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 MIR6885-201ENST00000612241 66 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AL138693.1-201ENST00000622219 129 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 AC083806.2-201ENST00000617795 2685 ntBASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
PCDHGC4Q9Y5F7 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGC4Q9Y5F7 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGC4Q9Y5F7 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGC4Q9Y5F7 AP000473.2-201ENST00000602659 1537 ntBASIC6.71□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms