Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB11Q9Y5F2 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 SPATA31C1-201ENST00000420021 3895 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AL034417.4-202ENST00000642135 2236 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 USP9YP4-201ENST00000424401 1745 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 RNU4-1-201ENST00000363925 141 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 RN7SKP107-201ENST00000364157 290 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 RN7SKP55-201ENST00000364888 307 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 RN7SKP148-201ENST00000410179 275 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 RN7SKP254-201ENST00000410685 310 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC008753.1-201ENST00000423096 284 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 GSTA6P-201ENST00000424144 582 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 CYP4F32P-201ENST00000426492 504 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 Z82205.1-201ENST00000428456 297 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 RPS10P21-201ENST00000430654 475 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC234771.4-201ENST00000441416 730 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 GOT2P2-201ENST00000450663 1251 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 CACYBPP2-201ENST00000453625 678 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AL355032.1-201ENST00000472981 438 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC091982.1-202ENST00000473923 343 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 RN7SL836P-201ENST00000476140 296 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AL163540.1-201ENST00000485382 386 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC010587.1-201ENST00000505809 469 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 NPM1P41-201ENST00000512920 831 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC123904.2-201ENST00000548059 300 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC019322.1-201ENST00000571869 389 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC009597.2-201ENST00000604659 592 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC009779.8-202ENST00000607990 932 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC103710.3-201ENST00000608157 948 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 OR10AB1P-201ENST00000609613 938 ntBASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB11Q9Y5F2 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PCDHB11Q9Y5F2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
PCDHB11Q9Y5F2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDHB11Q9Y5F2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB11Q9Y5F2 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB11Q9Y5F2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB11Q9Y5F2 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB11Q9Y5F2 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB11Q9Y5F2 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDHB11Q9Y5F2 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
PCDHB11Q9Y5F2 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.87□□□□□ -1.31
PCDHB11Q9Y5F2 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms