Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 AC098614.1-202ENST00000634895 1830 ntBASIC9.08□□□□□ -0.96
TRIM35Q9UPQ4 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AC104837.1-201ENST00000444644 1587 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AL512353.3-201ENST00000417517 1326 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 Y_RNA.152-201ENST00000363578 100 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 RNU6-1097P-201ENST00000363586 107 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 RNU6-740P-201ENST00000364734 105 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 MIR1252-201ENST00000408861 65 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 UQCRBP1-201ENST00000421129 336 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 COX6CP17-201ENST00000421389 185 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 YWHAZP8-201ENST00000436935 731 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AC002504.1-201ENST00000438281 691 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 HBG2-204ENST00000444587 307 ntTSL 2 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 RPL32P9-201ENST00000487963 407 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AC091965.3-201ENST00000506236 208 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 GNAI2P1-201ENST00000541815 315 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AC010547.7-201ENST00000570323 333 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 PPIAP14-201ENST00000577627 496 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AC243773.3-201ENST00000613270 256 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AL023806.3-201ENST00000638502 2704 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 AC091544.5-201ENST00000620192 3815 ntBASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC9.07□□□□□ -0.96
TRIM35Q9UPQ4 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 HSPD1P4-201ENST00000547203 1702 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 RNU5E-1-201ENST00000362477 120 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 SNORA20.2-201ENST00000383922 131 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 Y_RNA.493-201ENST00000384422 102 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 RN7SKP266-201ENST00000410232 287 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 DYNLT3P2-201ENST00000442517 295 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 OSTCP8-201ENST00000445117 448 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 SLC31A1P1-201ENST00000451221 567 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AC005008.1-201ENST00000456151 612 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AC021074.2-201ENST00000468434 172 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AC116655.1-201ENST00000508324 901 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 RNA5SP92-201ENST00000516437 110 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 RNU6-273P-201ENST00000516937 96 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 IGLC4-201ENST00000517690 248 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AC025260.1-201ENST00000548858 430 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AC092332.1-201ENST00000563684 829 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 MIR4790-201ENST00000577799 79 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AL355297.3-201ENST00000604082 446 ntBASIC9.06□□□□□ -0.96
TRIM35Q9UPQ4 AC111186.1-201ENST00000604684 130 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms