Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC105105.5-201ENST00000622635 1294 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 OR56B2P-202ENST00000641377 2453 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 RAD17P1-201ENST00000418130 2042 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 SNORA62-201ENST00000365493 153 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 MIR659-201ENST00000384963 97 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 OR1F12-201ENST00000402365 945 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 CASKP1-201ENST00000412870 582 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 P2RY10P2-201ENST00000416730 913 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 COX6CP17-201ENST00000421389 185 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 AC073587.1-201ENST00000447093 876 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 AC098799.3-201ENST00000506095 438 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 AC108043.1-201ENST00000512696 574 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 RNA5SP360-201ENST00000516555 118 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 AC068831.4-201ENST00000556118 109 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 RPL21P7-201ENST00000557463 483 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 AC008782.1-201ENST00000603386 430 ntBASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLIP2Q9UDT6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.4□□□□□ -1.55
CLIP2Q9UDT6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLIP2Q9UDT6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.4□□□□□ -1.55
CLIP2Q9UDT6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 ELOCP19-201ENST00000411919 318 ntBASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 RAB9AP4-201ENST00000415230 609 ntBASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 AC073136.2-201ENST00000417282 849 ntBASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 RPL7AP25-201ENST00000423357 805 ntBASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 MTCO1P51-201ENST00000427672 1060 ntBASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 PTMAP3-201ENST00000447474 330 ntBASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 RN7SL817P-201ENST00000480777 288 ntBASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 CD24P2-201ENST00000565486 219 ntBASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 AC026979.4-201ENST00000606555 645 ntBASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 AL359757.1-201ENST00000623176 255 ntBASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 AC135352.1-201ENST00000506173 1418 ntBASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP2Q9UDT6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AL391684.1-202ENST00000641293 1636 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 RPL32P3-201ENST00000359025 275 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AC104297.1-201ENST00000393779 870 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 RAB28P1-201ENST00000411517 641 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AC009237.10-201ENST00000414112 510 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 PPIAP13-201ENST00000434706 478 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 RPL23AP93-201ENST00000440847 484 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms