Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 AL035413.2-201ENST00000604801 525 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AP003400.3-201ENST00000624904 346 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AL731532.1-201ENST00000623972 4236 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AC009962.1-201ENST00000567327 3813 ntBASIC6.19□□□□□ -1.42
SSU72Q9NP77 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SSU72Q9NP77 AC137056.2-201ENST00000624055 1958 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 AL138847.1-201ENST00000258651 546 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 RN7SKP128-201ENST00000364270 303 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 RPL31P1-201ENST00000398116 372 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AL450338.1-201ENST00000407987 512 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 SNORA77.2-201ENST00000408571 112 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 FABP7P1-201ENST00000424004 391 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 BX890604.2-201ENST00000427883 474 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 BMS1P19-201ENST00000433925 393 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 RPL37P21-201ENST00000435890 276 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AL139135.2-201ENST00000445040 433 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 NPM1P39-201ENST00000449818 867 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 GAPDHP17-201ENST00000449858 1001 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 PMCHL2-203ENST00000457791 237 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC092757.1-201ENST00000467293 467 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AL035404.1-201ENST00000497982 568 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC018710.1-201ENST00000506509 158 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 MTND1P35-201ENST00000526739 508 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AL133399.1-201ENST00000527476 298 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 FAM92A1P1-201ENST00000528023 890 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC008083.2-201ENST00000546707 476 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC005519.1-201ENST00000554490 601 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 AL391840.1-201ENST00000571144 367 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 RN7SL426P-201ENST00000579106 295 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC009977.1-201ENST00000586015 570 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC005332.4-201ENST00000592752 579 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 BNIP3P11-201ENST00000603878 563 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC009233.1-201ENST00000616477 371 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC108479.2-201ENST00000617314 601 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 MIR1321-201ENST00000637766 79 ntBASIC6.18□□□□□ -1.42
SSU72Q9NP77 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSU72Q9NP77 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.18□□□□□ -1.42
SSU72Q9NP77 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSU72Q9NP77 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSU72Q9NP77 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSU72Q9NP77 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms