Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 PARP1P2-201ENST00000556806 195 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 MIR4277-201ENST00000578298 84 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 SNORD91B-202ENST00000608459 222 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 AL022401.1-201ENST00000619498 108 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 AC016717.3-201ENST00000624730 554 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TM9SF3Q9HD45 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 RNU6-386P-201ENST00000362650 107 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 SNORA73.1-201ENST00000363107 205 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 SNORD113.2-201ENST00000364166 89 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AC073464.3-201ENST00000422564 712 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AC093166.2-201ENST00000455969 1017 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AL445433.1-201ENST00000457507 257 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AC010627.1-201ENST00000503819 1294 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 IGBP1P5-201ENST00000507524 1000 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 RNA5SP249-201ENST00000516127 99 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AL110118.1-201ENST00000553543 400 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AL049839.1-201ENST00000556151 657 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 ATP5J2P6-201ENST00000565203 266 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AC136624.4-201ENST00000573044 370 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 MTCO2P22-201ENST00000603246 681 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AL445423.1-201ENST00000609941 536 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 MIR8069-1-201ENST00000616627 86 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 MIR8069-2-201ENST00000621412 86 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AC008758.3-201ENST00000507003 1829 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 AC087565.3-202ENST00000642085 1603 ntBASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.78□□□□□ -1.64
TM9SF3Q9HD45 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
TM9SF3Q9HD45 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
TM9SF3Q9HD45 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 AC139713.2-214ENST00000642059 1811 ntBASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 MAPK10-349ENST00000641767 3661 ntBASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 U3.22-201ENST00000391120 215 ntBASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 VDAC1P6-201ENST00000430062 855 ntBASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 CYCSP34-201ENST00000458172 304 ntBASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 SS18L2P2-201ENST00000583960 235 ntBASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 AC007423.1-201ENST00000605009 627 ntBASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 AP003497.2-201ENST00000624220 967 ntBASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.77□□□□□ -1.65
TM9SF3Q9HD45 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF3Q9HD45 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms