Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC126177.8-201ENST00000618339 1015 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 AC048341.3-201ENST00000619323 491 ntBASIC5.74□□□□□ -1.49
VPS11Q9H270 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS11Q9H270 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS11Q9H270 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS11Q9H270 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS11Q9H270 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS11Q9H270 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS11Q9H270 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
VPS11Q9H270 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
VPS11Q9H270 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 MTND4P16-201ENST00000466108 1367 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS11Q9H270 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 AC092681.1-201ENST00000297369 291 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VPS11Q9H270 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS11Q9H270 RNU5B-1-201ENST00000363286 116 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 U6.112-201ENST00000384129 70 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 RNU6-98P-201ENST00000384173 107 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 SNORD116-12-201ENST00000384468 92 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 DNAJC19P6-201ENST00000401853 280 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 NUP35P2-201ENST00000416748 943 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 RNF10P1-201ENST00000418589 369 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS11Q9H270 AL049610.1-201ENST00000423374 372 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AC113412.1-201ENST00000425840 504 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 FGF7P5-201ENST00000441829 291 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS11Q9H270 AL118496.2-201ENST00000448300 230 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 OR7E116P-201ENST00000448529 957 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS11Q9H270 AMD1P1-201ENST00000457220 922 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 RN7SL72P-201ENST00000460697 269 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 ABCC13-202ENST00000463099 3842 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 PSAT1P4-201ENST00000466500 526 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AC104763.1-201ENST00000475274 360 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AC068724.1-201ENST00000487100 792 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 RN7SL362P-201ENST00000494228 267 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AC112484.3-201ENST00000505910 329 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 RNA5SP230-201ENST00000517039 122 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS11Q9H270 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.73□□□□□ -1.49
VPS11Q9H270 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS11Q9H270 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS11Q9H270 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.73□□□□□ -1.49
VPS11Q9H270 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS11Q9H270 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS11Q9H270 MIR3915-201ENST00000578518 97 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 RN7SL230P-201ENST00000580835 303 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS11Q9H270 AC073544.2-201ENST00000601155 540 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AL109618.2-201ENST00000605527 211 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AC023813.4-201ENST00000607580 580 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AL139124.1-201ENST00000609123 421 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AC055764.2-201ENST00000610089 670 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 uc_338.29-201ENST00000615099 168 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AC016769.4-201ENST00000616893 535 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 AL136228.1-201ENST00000622221 319 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS11Q9H270 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS11Q9H270 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
VPS11Q9H270 AL137100.1-201ENST00000556703 1620 ntBASIC5.73□□□□□ -1.49
VPS11Q9H270 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS11Q9H270 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS11Q9H270 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS11Q9H270 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VPS11Q9H270 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC092376.2-201ENST00000622621 4116 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS11Q9H270 RNU6-543P-201ENST00000362576 108 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 Y_RNA.408-201ENST00000383987 102 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 MIR191-201ENST00000384873 92 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AL035419.1-201ENST00000397037 564 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 EI24P3-201ENST00000399046 1062 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS11Q9H270 AC048351.1-201ENST00000420064 602 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 AL139158.1-201ENST00000424719 340 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 RPS24P8-201ENST00000431490 402 ntBASIC5.72□□□□□ -1.49
VPS11Q9H270 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms