Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AL050321.1-201ENST00000432363 400 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AL590103.1-201ENST00000434488 307 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 AL592114.2-201ENST00000440142 532 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 BTF3P6-201ENST00000448054 499 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 OR52J1P-201ENST00000450596 932 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 MTND1P27-201ENST00000451117 902 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC3.68□□□□□ -1.82
LITAFQ99732 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.68□□□□□ -1.82
LITAFQ99732 RN7SL83P-201ENST00000468131 297 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC104689.1-201ENST00000473356 768 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AL161747.1-201ENST00000480068 358 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.68□□□□□ -1.82
LITAFQ99732 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.68□□□□□ -1.82
LITAFQ99732 AC010625.1-201ENST00000511296 403 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC108471.1-201ENST00000513977 287 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 RN7SKP31-201ENST00000516354 278 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.68□□□□□ -1.82
LITAFQ99732 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.68□□□□□ -1.82
LITAFQ99732 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LITAFQ99732 HIGD1AP10-201ENST00000527837 282 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 HMGB1P42-201ENST00000532126 553 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC084121.1-201ENST00000533882 835 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC092851.1-201ENST00000535964 478 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC007954.1-201ENST00000554198 494 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 GTF2IP8-201ENST00000560687 584 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AL390726.5-202ENST00000564800 256 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC012435.1-202ENST00000568772 240 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.68□□□□□ -1.82
LITAFQ99732 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 AC022884.2-201ENST00000578535 580 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 AC073544.2-201ENST00000601155 540 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AL390838.2-201ENST00000602394 274 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 DEFB131E-202ENST00000602581 683 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC3.68□□□□□ -1.82
LITAFQ99732 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 AC004492.1-201ENST00000607036 742 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AP000254.1-201ENST00000609934 520 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC245297.2-201ENST00000610119 565 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AL136981.2-201ENST00000617319 734 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC015914.2-201ENST00000618167 288 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 MIR6849-201ENST00000618543 69 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC022106.2-201ENST00000620114 757 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 MIR6839-201ENST00000620425 113 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 AC008443.7-201ENST00000622195 246 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC015871.5-202ENST00000623252 701 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.68□□□□□ -1.82
LITAFQ99732 AC092656.1-203ENST00000624134 423 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC135068.5-201ENST00000624197 983 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC016717.3-201ENST00000624730 554 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 ATE1-AS1-202ENST00000636460 506 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC3.68□□□□□ -1.82
LITAFQ99732 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 IFIT1P1-201ENST00000400497 1449 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.68□□□□□ -1.82
LITAFQ99732 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LITAFQ99732 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LITAFQ99732 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LITAFQ99732 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LITAFQ99732 OR55B1P-203ENST00000641518 2602 ntBASIC3.67□□□□□ -1.82
LITAFQ99732 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LITAFQ99732 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.67□□□□□ -1.82
LITAFQ99732 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LITAFQ99732 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LITAFQ99732 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LITAFQ99732 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LITAFQ99732 RNU6-839P-201ENST00000363347 108 ntBASIC3.67□□□□□ -1.82
LITAFQ99732 RNA5SP485-201ENST00000365053 119 ntBASIC3.67□□□□□ -1.82
LITAFQ99732 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LITAFQ99732 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC3.67□□□□□ -1.82
LITAFQ99732 RNU6-317P-201ENST00000384031 107 ntBASIC3.67□□□□□ -1.82
LITAFQ99732 Y_RNA.559-201ENST00000384686 107 ntBASIC3.67□□□□□ -1.82
LITAFQ99732 RNU6-253P-201ENST00000384730 105 ntBASIC3.67□□□□□ -1.82
LITAFQ99732 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LITAFQ99732 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LITAFQ99732 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LITAFQ99732 AC016739.1-201ENST00000405359 345 ntBASIC3.67□□□□□ -1.82
LITAFQ99732 AL139805.1-201ENST00000407837 289 ntBASIC3.67□□□□□ -1.82
LITAFQ99732 RNU2-42P-201ENST00000410697 113 ntBASIC3.67□□□□□ -1.82
LITAFQ99732 RN7SKP205-201ENST00000410999 307 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms