Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC008694.2-201ENST00000517591 306 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 AC025857.1-201ENST00000525252 377 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.27□□□□□ -1.73
COL21A1Q96P44 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.27□□□□□ -1.73
COL21A1Q96P44 AC063949.1-201ENST00000552900 865 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 AC105129.1-201ENST00000560250 297 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.27□□□□□ -1.73
COL21A1Q96P44 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.27□□□□□ -1.73
COL21A1Q96P44 RN7SL690P-201ENST00000582087 240 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL21A1Q96P44 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.27□□□□□ -1.73
COL21A1Q96P44 AC073091.2-201ENST00000603205 907 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 AL353726.1-201ENST00000614041 1000 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 AC073342.3-201ENST00000624211 193 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL21A1Q96P44 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL21A1Q96P44 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL21A1Q96P44 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
COL21A1Q96P44 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL21A1Q96P44 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.27□□□□□ -1.73
COL21A1Q96P44 MTND4P26-201ENST00000415971 1359 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 AC006971.1-201ENST00000407916 4486 ntBASIC4.27□□□□□ -1.73
COL21A1Q96P44 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL21A1Q96P44 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL21A1Q96P44 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 OR10AB1P-202ENST00000641219 1686 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL21A1Q96P44 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 RN7SKP224-201ENST00000364140 325 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 MT-RNR1-201ENST00000389680 954 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 ATP5F1P2-201ENST00000398143 760 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL21A1Q96P44 RPS16P5-201ENST00000406501 404 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC019050.1-201ENST00000418508 492 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL21A1Q96P44 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC069285.2-201ENST00000440210 275 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC073264.2-201ENST00000448886 166 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 ISCUP1-201ENST00000454451 448 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 MTND4LP2-201ENST00000502312 285 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC069240.1-201ENST00000548774 375 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 ELOCP28-201ENST00000590044 317 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 AL133338.2-201ENST00000604292 736 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 MIR6820-201ENST00000611508 62 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 AL731566.2-201ENST00000618971 317 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL21A1Q96P44 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 AC018529.3-201ENST00000624212 2254 ntBASIC4.26□□□□□ -1.73
COL21A1Q96P44 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL21A1Q96P44 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COL21A1Q96P44 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL21A1Q96P44 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL21A1Q96P44 KPNA2P2-201ENST00000419546 1489 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL21A1Q96P44 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL21A1Q96P44 MIR365B-201ENST00000362317 111 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 RNA5SP52-201ENST00000362448 134 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 RNVU1-6-201ENST00000364688 164 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL21A1Q96P44 RNA5SP397-201ENST00000391323 118 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 AL049697.2-201ENST00000403708 294 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 FCF1P5-201ENST00000406490 482 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 AL590139.1-201ENST00000416267 400 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL21A1Q96P44 RPS12P5-201ENST00000423449 371 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 MTND4LP13-201ENST00000425022 298 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL21A1Q96P44 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 AL513533.1-201ENST00000453728 415 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.25□□□□□ -1.73
COL21A1Q96P44 SCARNA10-201ENST00000459255 330 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 RPL5P30-201ENST00000465511 891 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 RPL7AP10-201ENST00000481016 791 ntBASIC4.25□□□□□ -1.73
COL21A1Q96P44 HMGB3P13-201ENST00000511263 607 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms