Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 DDX18P4-201ENST00000511690 1966 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 RNA5SP507-201ENST00000363603 121 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC007618.1-201ENST00000366455 732 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC007738.1-201ENST00000413892 348 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 OR51A6P-201ENST00000418680 1004 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 MTND2P8-201ENST00000450555 1025 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC092155.2-201ENST00000454675 477 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 RN7SL826P-201ENST00000479724 288 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 RN7SL814P-201ENST00000487715 300 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC083923.1-201ENST00000523708 376 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 OR8I1P-201ENST00000529291 931 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 CYP2C60P-201ENST00000566088 139 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 MTATP6P24-201ENST00000576835 677 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 RN7SL708P-201ENST00000580952 299 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 PRPF19P1-201ENST00000584766 898 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AL365400.2-201ENST00000605604 902 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC006946.3-201ENST00000609791 756 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC140725.3-201ENST00000616193 880 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AL035461.2-201ENST00000619201 524 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC074140.1-201ENST00000621617 208 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 AL606537.1-201ENST00000607258 2011 ntBASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CHMP4CQ96CF2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 ANKRD36P1-201ENST00000344424 659 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 IGKV7-3-201ENST00000357453 298 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 RNA5SP223-201ENST00000365174 120 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 RNU1-74P-201ENST00000384108 171 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 RNU6-98P-201ENST00000384173 107 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 MCTS2P-201ENST00000394552 546 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC092648.1-201ENST00000425870 423 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 HMGB3P5-201ENST00000428894 612 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC009238.2-201ENST00000431026 355 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 MTATP6P17-201ENST00000431030 672 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 PSMD10P3-201ENST00000437000 448 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 PTGES3P1-201ENST00000439531 483 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 EIF2S2P2-201ENST00000447161 982 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AL050341.1-201ENST00000447743 313 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 OTX2P1-201ENST00000450956 354 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 RN7SL610P-201ENST00000463845 291 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC004453.1-201ENST00000487895 408 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC093890.1-201ENST00000502554 540 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC098862.1-201ENST00000504991 413 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC020699.1-201ENST00000505161 445 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC119751.1-201ENST00000513357 765 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AP002812.4-201ENST00000532139 286 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AL450336.1-201ENST00000605180 586 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC024940.4-201ENST00000605507 246 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC106052.1-201ENST00000608029 497 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC013468.1-201ENST00000608680 598 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC004948.1-201ENST00000609858 672 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 FRG1EP-201ENST00000634469 770 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 U6.107-201ENST00000637108 79 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 AC133552.1-201ENST00000569988 4007 ntBASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms