Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL365396.1-201ENST00000430854 671 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC009238.2-201ENST00000431026 355 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 RPL31P15-201ENST00000449770 338 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC091860.1-201ENST00000505723 432 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 PRELID3BP4-201ENST00000515476 571 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC087373.1-201ENST00000524920 491 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC027104.1-201ENST00000563702 681 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC010487.1-201ENST00000594408 1172 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AL158042.1-201ENST00000605338 460 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC127024.6-201ENST00000621598 424 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AP000648.2-201ENST00000624182 404 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC119674.1-212ENST00000641155 993 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AL672167.1-204ENST00000641875 3017 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 TCP11X1-202ENST00000622971 1372 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC235565.1-201ENST00000456962 1325 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 RNU6-83P-201ENST00000384568 112 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AL031985.1-201ENST00000392713 418 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AL035419.1-201ENST00000397037 564 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 ERHP2-201ENST00000402323 299 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 CTSL3P-202ENST00000412179 788 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC013404.1-201ENST00000413068 249 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 RPF2P1-201ENST00000424137 906 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 RPS29P14-201ENST00000431518 171 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 MTCO1P52-201ENST00000433928 531 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 RPS29P10-201ENST00000439197 166 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AL353093.1-201ENST00000441292 436 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AL133217.1-201ENST00000450980 425 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC233982.1-201ENST00000451247 436 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 RPL7P6-201ENST00000480903 738 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC126121.1-201ENST00000482313 553 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 RN7SL447P-201ENST00000494711 245 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 RN7SL466P-201ENST00000497546 295 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 RNU6-1129P-201ENST00000515964 104 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC022404.1-201ENST00000555320 273 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC127381.1-201ENST00000555979 939 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC011840.5-201ENST00000582125 771 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC021749.1-201ENST00000604322 607 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC018695.5-201ENST00000605872 315 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AP000255.1-201ENST00000610276 676 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms