Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AL845321.1-201ENST00000444603 348 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AL450996.1-201ENST00000445574 1202 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 SS18L2P1-201ENST00000445923 213 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 RN7SL233P-201ENST00000469988 277 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC040975.1-201ENST00000472104 316 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 RN7SL647P-201ENST00000485429 300 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 RPS3AP50-201ENST00000487064 803 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC093267.1-201ENST00000489176 961 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 RPL23AP72-201ENST00000492447 435 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC108693.1-201ENST00000496068 432 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC023818.1-201ENST00000498379 384 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 RNU6-410P-201ENST00000517006 107 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC120036.3-201ENST00000517826 292 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC005668.1-201ENST00000571142 476 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC015818.6-201ENST00000584274 634 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AL603758.1-201ENST00000618654 241 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC099654.15-201ENST00000639802 509 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 CYP2G2P-201ENST00000594920 1485 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 CUBNP3-201ENST00000457461 1784 ntBASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
DEPDC4Q8N2C3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
DEPDC4Q8N2C3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
DEPDC4Q8N2C3 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.71□□□□□ -1.33
DEPDC4Q8N2C3 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
DEPDC4Q8N2C3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
DEPDC4Q8N2C3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
DEPDC4Q8N2C3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC006020.1-201ENST00000420179 1854 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 Y_RNA.255-201ENST00000364581 97 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AL024474.1-201ENST00000404655 591 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 RNU2-9P-201ENST00000410194 145 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 GEMIN2P2-201ENST00000418195 715 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 RPS15AP30-201ENST00000420976 390 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AL731534.1-201ENST00000434711 269 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 RPS15AP9-201ENST00000439856 381 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 SLC25A18P1-201ENST00000449385 454 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 Y_RNA.691-201ENST00000516611 103 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 RPL10P18-201ENST00000519384 309 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC068714.1-201ENST00000559623 800 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 MIR3135A-201ENST00000578460 77 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC097381.3-201ENST00000608962 462 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC093913.1-201ENST00000614178 329 ntBASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
DEPDC4Q8N2C3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms