Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
KRT78Q8N1N4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC007938.2-201ENST00000604666 2634 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 HSPA8P14-201ENST00000552265 1805 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 RNU6-619P-201ENST00000365146 108 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 RN7SKP292-201ENST00000365522 317 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 RNA5SP122-201ENST00000384457 108 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 RNU6-1151P-201ENST00000384684 107 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC211486.3-201ENST00000412694 621 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC007161.1-204ENST00000423039 460 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC007559.1-201ENST00000428736 355 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC002069.1-201ENST00000429649 1159 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC002504.1-201ENST00000438281 691 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AL359265.1-201ENST00000440296 795 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC073465.2-201ENST00000440938 498 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 Z77249.1-201ENST00000444622 1175 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 EEF1B2P6-201ENST00000445713 673 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AZGP1P2-201ENST00000454506 345 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 NECAP1P2-201ENST00000455668 727 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 PNPLA4P1-201ENST00000458328 305 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC004263.1-201ENST00000479327 332 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC104971.1-201ENST00000495117 578 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC011352.3-201ENST00000505162 593 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 FABP5P12-201ENST00000515543 389 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 FTH1P11-201ENST00000517577 551 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC112191.2-201ENST00000522428 333 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC090888.2-201ENST00000559765 1144 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC110743.1-201ENST00000584870 478 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC027243.2-201ENST00000602530 724 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 uc_338.7-201ENST00000621834 124 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRT78Q8N1N4 SAMMSON-213ENST00000641336 1521 ntBASIC5.33□□□□□ -1.56
KRT78Q8N1N4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.32□□□□□ -1.56
KRT78Q8N1N4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 AC016716.1-201ENST00000265882 708 ntBASIC5.32□□□□□ -1.56
KRT78Q8N1N4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 RNU6-839P-201ENST00000363347 108 ntBASIC5.32□□□□□ -1.56
KRT78Q8N1N4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 SNORD56.6-201ENST00000384569 71 ntBASIC5.32□□□□□ -1.56
KRT78Q8N1N4 LRRC37BP1-201ENST00000398851 714 ntBASIC5.32□□□□□ -1.56
KRT78Q8N1N4 AC119751.3-201ENST00000399720 670 ntBASIC5.32□□□□□ -1.56
KRT78Q8N1N4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.32□□□□□ -1.56
KRT78Q8N1N4 AP000534.2-201ENST00000412729 568 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms