Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 DEFB109F-201ENST00000491870 277 ntBASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 RNA5SP497-201ENST00000516081 97 ntBASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 AC090151.1-201ENST00000520784 730 ntBASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 AL049536.1-201ENST00000625043 744 ntBASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC65Q8IXS2 DHX40P1-201ENST00000588725 1412 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 MTND4P26-201ENST00000415971 1359 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 RNA5SP28-201ENST00000363841 119 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 RNU1-44P-201ENST00000384453 163 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC009237.10-201ENST00000414112 510 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC019050.1-201ENST00000418508 492 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC004448.2-201ENST00000422360 586 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 TRGV7-201ENST00000427089 353 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 CDY14P-201ENST00000431260 1014 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 HMGB3P10-201ENST00000434734 572 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 CDY12P-201ENST00000440679 1015 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 CDY13P-201ENST00000445813 1015 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 CDY23P-201ENST00000451661 1014 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 DDX39BP2-208ENST00000453923 258 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC092905.1-201ENST00000467527 949 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 RN7SL817P-201ENST00000480777 288 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC090013.1-201ENST00000485147 480 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AP006289.1-201ENST00000538089 277 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 SLC25A36P1-201ENST00000590111 465 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC100847.1-201ENST00000611316 481 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC006065.6-201ENST00000625201 545 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 OR2L1P-202ENST00000641567 1023 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 AC007390.2-201ENST00000606229 3803 ntBASIC4.97□□□□□ -1.61
CCDC65Q8IXS2 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.96□□□□□ -1.61
CCDC65Q8IXS2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC65Q8IXS2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.96□□□□□ -1.61
CCDC65Q8IXS2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CCDC65Q8IXS2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC079741.1-201ENST00000321498 212 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 RNVU1-6-201ENST00000364688 164 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 RNA5SP372-201ENST00000390836 115 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AL078604.1-201ENST00000404609 466 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 RPS16P5-201ENST00000406501 404 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 NPM1P26-201ENST00000426339 738 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 MTCO3P17-201ENST00000443775 513 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 RPS27AP15-201ENST00000447672 466 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC133473.1-201ENST00000455173 299 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 RPS27AP17-201ENST00000463344 455 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 CCDC75P1-201ENST00000469247 791 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 VWA8P1-201ENST00000510889 176 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms