Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 Y_RNA.556-201ENST00000384677 113 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 MTCO3P19-201ENST00000415864 321 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 SPA17P1-201ENST00000416656 452 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 DSTNP5-201ENST00000427921 523 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 YWHAEP5-201ENST00000431545 765 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AL606489.2-201ENST00000433886 234 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 MTND5P15-201ENST00000434246 349 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 GAPDHP59-201ENST00000435908 267 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 POU5F1P5-201ENST00000445059 658 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC012512.1-201ENST00000446594 718 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AL034399.1-201ENST00000451535 380 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 RPS20P4-201ENST00000461659 355 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 RPS27AP17-201ENST00000463344 455 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC068587.1-201ENST00000483613 781 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 RN7SL362P-201ENST00000494228 267 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 DYNLL1P6-201ENST00000503440 264 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 MTCYBP40-201ENST00000509390 1135 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 RPL7L1P13-201ENST00000511702 739 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC018797.3-201ENST00000513388 1241 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 RNU2-46P-201ENST00000517038 113 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AP000827.1-201ENST00000527814 258 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC084121.1-201ENST00000533882 835 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC026956.1-201ENST00000558741 396 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 GTF2IP8-201ENST00000560687 584 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 RBM22P12-201ENST00000567098 1255 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 TVP23CP2-201ENST00000571473 623 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC011453.2-201ENST00000603737 729 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 APOOP1-201ENST00000604695 592 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 SNORD96A-201ENST00000606577 79 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC098479.1-201ENST00000609225 154 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 uc_338.31-201ENST00000615595 186 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AL122023.1-201ENST00000622847 530 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AL732618.1-201ENST00000623251 301 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC021242.1-201ENST00000507315 2035 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 ZNF807-201ENST00000328088 1707 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS3Q8IXF0 RNU5D-1-201ENST00000363299 116 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 SNORA70.3-201ENST00000365075 132 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 RNA5SP77-201ENST00000365394 120 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 SNRPFP1-201ENST00000414761 252 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC133104.1-201ENST00000429100 218 ntBASIC7□□□□□ -1.29
NPAS3Q8IXF0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7□□□□□ -1.29
NPAS3Q8IXF0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms