Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LINC00346Q8IVM7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
LINC00346Q8IVM7 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LINC00346Q8IVM7 AC092747.4-201ENST00000620519 1861 ntBASIC4.6□□□□□ -1.67
LINC00346Q8IVM7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 RNA5SP242-201ENST00000364171 118 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 SNORA17A-201ENST00000391185 133 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AL009174.1-201ENST00000426577 416 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AL161722.2-201ENST00000434731 981 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 RPS26P41-201ENST00000450370 284 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 RNU7-140P-201ENST00000459546 60 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 RN7SL184P-201ENST00000488308 297 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 HMGB1P21-201ENST00000502313 581 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AC122134.1-202ENST00000569111 1201 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 BPTFP1-201ENST00000579209 492 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 AL589674.2-201ENST00000604304 337 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 BNIP3P35-201ENST00000604530 490 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 SNORA17.5-201ENST00000630429 132 ntBASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.59□□□□□ -1.67
LINC00346Q8IVM7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
LINC00346Q8IVM7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 SCARNA15-201ENST00000607520 4325 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 RNU6-353P-201ENST00000364266 108 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 RNA5SP90-201ENST00000364801 99 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 RNU6-925P-201ENST00000384629 104 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 RNU6-1151P-201ENST00000384684 107 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 OR8V1P-201ENST00000395193 873 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 MTCO2P31-201ENST00000402702 684 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 PRRC2CP1-201ENST00000404428 159 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 RPL35AP24-201ENST00000413846 330 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 TAF13P2-201ENST00000416876 286 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 OR6C64P-201ENST00000419708 825 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 AC104843.2-201ENST00000427666 297 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 RPL37P1-201ENST00000432310 284 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 RPS29P10-201ENST00000439197 166 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 RPS26P30-201ENST00000443431 335 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 MRPL35P2-201ENST00000448009 511 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 RPL7P31-201ENST00000450192 724 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 BX842559.2-201ENST00000451418 605 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 AC023141.9-201ENST00000458734 412 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 RPL21P71-201ENST00000465598 459 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 AL133445.1-201ENST00000467051 452 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 RNA5SP362-201ENST00000516048 118 ntBASIC4.58□□□□□ -1.68
LINC00346Q8IVM7 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms