Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LYSMD3Q7Z3D4 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 SNORD116-29-201ENST00000384516 83 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 RNU4-70P-201ENST00000384579 139 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 SNORD116-23-201ENST00000384645 92 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 RNU6-1158P-201ENST00000391167 107 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 CISD1P1-201ENST00000393907 327 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AL034417.1-201ENST00000399343 800 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 RN7SKP271-201ENST00000410528 320 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 DUTP4-201ENST00000424782 475 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC023347.2-201ENST00000433994 462 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC002504.1-201ENST00000438281 691 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AL845321.1-201ENST00000444603 348 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 RN7SL492P-201ENST00000460700 295 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 RPS26P11-201ENST00000463445 348 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 RPS26P6-201ENST00000475156 348 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC104687.1-201ENST00000485829 412 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 RPL23AP80-201ENST00000495605 424 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC026801.2-201ENST00000515352 425 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 MTCO2P24-201ENST00000515611 426 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 SNORD60.2-201ENST00000516883 86 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 Y_RNA.718-201ENST00000517110 102 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 RNU6-1314P-201ENST00000517139 104 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 DPPA3P2-202ENST00000557188 1219 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC115621.1-201ENST00000604653 858 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 BCRP9-201ENST00000605312 388 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC004908.1-201ENST00000606572 541 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 AP004247.3-201ENST00000608682 624 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 BX323046.1-201ENST00000610145 535 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 HMGB1P24-202ENST00000615653 685 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 MTND4LP32-201ENST00000636111 270 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 TATDN2P3-201ENST00000452855 3665 ntBASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
LYSMD3Q7Z3D4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms