Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 SNORA17A-201ENST00000391185 133 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 AL133388.1-201ENST00000404509 287 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC104333.2-201ENST00000422630 192 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 RPS26P47-201ENST00000427219 348 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC092634.2-201ENST00000428146 1010 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AL589765.3-201ENST00000446084 462 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 RPL7P61-201ENST00000451721 751 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC244505.3-201ENST00000454598 187 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 BX248409.1-201ENST00000455497 255 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 RN7SL814P-201ENST00000487715 300 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 IGBP1P5-201ENST00000507524 1000 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC110760.3-202ENST00000515177 371 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 RN7SKP283-201ENST00000517197 270 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 MTCO1P40-201ENST00000574371 625 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC000068.2-201ENST00000608816 460 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 RNA5SP440-201ENST00000612665 119 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC008115.4-201ENST00000619780 775 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 SNORA17.5-201ENST00000630429 132 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 AL353743.4-201ENST00000422653 1547 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 AC063976.2-201ENST00000425667 3556 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 AL672167.1-204ENST00000641875 3017 ntBASIC5.42□□□□□ -1.54
CCDC38Q502W7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC38Q502W7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC38Q502W7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC38Q502W7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC119744.1-201ENST00000454746 1715 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC38Q502W7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 ANKRD36P1-201ENST00000344424 659 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 MIR323A-201ENST00000362199 86 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 RNA5SP178-201ENST00000410380 128 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 RNU6-77P-201ENST00000410554 91 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC007738.1-201ENST00000413892 348 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 MTCYBP15-201ENST00000433123 1127 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 HMGB1P45-201ENST00000435986 653 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 ACTR3P2-201ENST00000439585 1257 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC105399.1-202ENST00000447303 205 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 DNAJB5P1-201ENST00000454004 806 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC011225.1-201ENST00000457751 369 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC108161.1-201ENST00000461060 402 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 RN7SL51P-201ENST00000468230 285 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 RPL35AP19-201ENST00000469425 329 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 RN7SL174P-201ENST00000475578 289 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC091959.2-201ENST00000477363 321 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC058823.1-201ENST00000485315 474 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 RPL7P41-201ENST00000485823 957 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 HMGB1P44-201ENST00000508597 572 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 LRRC6P1-201ENST00000532188 885 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 AL049838.1-201ENST00000563647 981 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 MTND1P8-201ENST00000571424 950 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 RBM22P1-201ENST00000578589 1214 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC112220.2-201ENST00000605513 533 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC38Q502W7 VN1R74P-201ENST00000613259 503 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC38Q502W7 AC104985.3-201ENST00000623479 597 ntBASIC5.41□□□□□ -1.54
CCDC38Q502W7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC38Q502W7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC38Q502W7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.41□□□□□ -1.54
CCDC38Q502W7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC134882.1-201ENST00000603738 1676 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms