Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RN7SL565P-201ENST00000618246 284 ntBASIC4.62□□□□□ -1.67
PTPN20Q4JDL3 AC007546.1-201ENST00000619452 559 ntBASIC4.62□□□□□ -1.67
PTPN20Q4JDL3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN20Q4JDL3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTPN20Q4JDL3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.62□□□□□ -1.67
PTPN20Q4JDL3 AC053481.2-202ENST00000582394 1500 ntBASIC4.62□□□□□ -1.67
PTPN20Q4JDL3 AC025031.4-201ENST00000621248 3271 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 MIR331-201ENST00000362302 94 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AL583835.1-201ENST00000399570 407 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 HDGFP1-201ENST00000405943 252 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 RPL37P18-201ENST00000411602 243 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 UBTFL3-201ENST00000418934 1024 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AP000936.3-201ENST00000438127 255 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 UBTFL6-201ENST00000477929 1024 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 RPL21P6-201ENST00000479171 504 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 RN7SL459P-201ENST00000481078 302 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AC008745.1-201ENST00000604064 271 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AL713998.2-201ENST00000604538 1198 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AL354984.3-201ENST00000604803 325 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AL135786.2-201ENST00000608422 615 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AC022960.2-201ENST00000616300 666 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AL138721.1-201ENST00000616756 179 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AC023509.5-201ENST00000617434 807 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 FP325313.1-201ENST00000638228 703 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 DDX18P4-201ENST00000511690 1966 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 AC000123.3-201ENST00000624029 4975 ntBASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN20Q4JDL3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AP001273.1-201ENST00000624493 3152 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 SNORA68.2-201ENST00000391263 128 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 ELOCP19-201ENST00000411919 318 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 CNOT7P1-201ENST00000429006 852 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 RPL12P28-201ENST00000430852 489 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 NFYAP1-201ENST00000431953 972 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 RPL35AP15-201ENST00000468042 339 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AC025674.1-201ENST00000507074 324 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 SNORD39.2-201ENST00000579995 76 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AC090948.1-201ENST00000607464 549 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AC019193.2-201ENST00000610012 634 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AP003499.2-201ENST00000624100 483 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 AC017104.4-201ENST00000636283 1592 ntBASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PTPN20Q4JDL3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 AC067945.1-201ENST00000342609 618 ntBASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 RNA5SP447-201ENST00000363749 119 ntBASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 BMS1P3-201ENST00000372011 932 ntBASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 OR13C3-201ENST00000374781 1108 ntBASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PTPN20Q4JDL3 RPL21P108-201ENST00000413857 481 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms