Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
RSPO4Q2I0M5 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO4Q2I0M5 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RSPO4Q2I0M5 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC007342.5-201ENST00000571340 2142 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 Y_RNA.31-201ENST00000362574 102 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 Y_RNA.47-201ENST00000362697 108 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 RNU5E-8P-201ENST00000363502 116 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 RN7SKP160-201ENST00000363804 340 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 RNA5SP27-201ENST00000363839 119 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 NPM1P40-201ENST00000412758 733 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC109780.2-201ENST00000413467 845 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 SDHDP6-201ENST00000414693 480 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 PTP4A1P1-201ENST00000420539 515 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 BEND7P1-201ENST00000422058 457 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 VDAC1P6-201ENST00000430062 855 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 RPL23AP50-201ENST00000434149 455 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AL353662.1-201ENST00000439099 327 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 RPL5P25-201ENST00000441148 775 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC073850.1-201ENST00000449243 255 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC091685.2-201ENST00000454924 864 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 HMGN2P26-201ENST00000463169 339 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 GLRXP3-201ENST00000470810 321 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 PFN1P6-201ENST00000476786 399 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 Y_RNA.691-201ENST00000516611 103 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC087808.1-201ENST00000520501 361 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC087241.2-201ENST00000535801 324 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC063950.1-201ENST00000552036 308 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC022404.1-201ENST00000555320 273 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 CTSLP2-201ENST00000580501 394 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 UG0898H09-202ENST00000623646 7040 ntBASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RSPO4Q2I0M5 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 AC010928.1-201ENST00000592477 1447 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 NACAP7-201ENST00000407371 609 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 RNU4-34P-201ENST00000410431 124 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 U3.43-201ENST00000410734 213 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 RNU6-373P-201ENST00000411247 98 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 AL359704.1-201ENST00000411586 781 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 DPPA2P3-201ENST00000411853 655 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 PMCHL1-202ENST00000423102 261 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 AL445669.1-201ENST00000426743 755 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 FAM96AP1-201ENST00000430879 482 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 PGBD4P3-201ENST00000440731 581 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 RPL21P133-201ENST00000443666 476 ntBASIC6.34□□□□□ -1.39
RSPO4Q2I0M5 AC002486.2-201ENST00000447806 590 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms