Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PCDH1Q08174 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC009220.2-201ENST00000489759 1751 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC010894.1-201ENST00000313760 361 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 Y_RNA.142-201ENST00000363491 102 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 RNU6-115P-201ENST00000364310 107 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 RNA5SP140-201ENST00000364524 92 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 Y_RNA.460-201ENST00000384255 102 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AL590290.1-201ENST00000405336 380 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC073264.1-201ENST00000411508 416 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AL672212.1-201ENST00000422246 400 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 PTPN2P1-201ENST00000423212 1072 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 ATP5HP2-201ENST00000433885 485 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 PCNPP2-201ENST00000441651 455 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 NDUFA5P7-201ENST00000452914 242 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 TRGVB-201ENST00000453257 471 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AC103563.5-201ENST00000455643 364 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 RN7SL267P-201ENST00000485107 261 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC112204.1-201ENST00000502591 103 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 RNU6-150P-201ENST00000516237 95 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC008429.2-201ENST00000523057 864 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDH1Q08174 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDH1Q08174 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC026956.1-201ENST00000558741 396 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDH1Q08174 AC022916.3-201ENST00000592961 742 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 RPL12P25-202ENST00000598100 674 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AL133338.2-201ENST00000604292 736 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AC114477.1-201ENST00000605097 605 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH1Q08174 MIR7973-1-201ENST00000614683 76 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AC005899.7-201ENST00000618199 588 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 TCL6_3.1-201ENST00000619064 137 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AC090574.1-201ENST00000623186 233 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AC019278.1-201ENST00000623516 479 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDH1Q08174 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.32□□□□□ -1.4
PCDH1Q08174 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH1Q08174 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDH1Q08174 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH1Q08174 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDH1Q08174 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH1Q08174 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH1Q08174 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH1Q08174 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDH1Q08174 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH1Q08174 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH1Q08174 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCDH1Q08174 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDH1Q08174 RNU1-5P-201ENST00000362684 144 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 U8.3-201ENST00000363321 132 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 Y_RNA.162-201ENST00000363683 102 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDH1Q08174 SNRPEP2-201ENST00000397592 279 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 NPM1P38-201ENST00000403835 865 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AL353133.1-201ENST00000407695 401 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 MIR1302-11-201ENST00000408051 138 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 MIR1302-9-201ENST00000408365 138 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 MIR1302-10-201ENST00000408734 138 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 RNU6-195P-201ENST00000411352 109 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH1Q08174 HSPD1P12-201ENST00000429127 1069 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms