| APLP2 | Q06481 | MGAT2P1-201 | ENST00000449718 | 797 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AL157400.2-201 | ENST00000454174 | 563 nt | TSL 2 BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | MYL6P4-201 | ENST00000477911 | 453 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | MBNL1-217 | ENST00000485509 | 1023 nt | TSL 1 (best) BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | RN7SL306P-201 | ENST00000492941 | 296 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | MBNL1-219 | ENST00000492948 | 1054 nt | TSL 1 (best) BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC106872.3-201 | ENST00000495104 | 446 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC091849.1-201 | ENST00000509920 | 121 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | RNU6-150P-201 | ENST00000516237 | 95 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC037450.1-201 | ENST00000518129 | 647 nt | TSL 3 BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AP000442.2-201 | ENST00000531108 | 440 nt | TSL 3 BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AL162632.2-201 | ENST00000553933 | 399 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | TRAV15-201 | ENST00000556680 | 249 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | TRIM69-204 | ENST00000558329 | 1211 nt | TSL 1 (best) BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | FAM30C-201 | ENST00000561158 | 410 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC027801.5-201 | ENST00000574365 | 416 nt | TSL 3 BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC099489.2-201 | ENST00000574976 | 260 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | ZNF208-204 | ENST00000599916 | 740 nt | TSL 1 (best) BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | BCRP9-201 | ENST00000605312 | 388 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | RNF219-AS1-205 | ENST00000605996 | 792 nt | TSL 5 BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AL031777.2-201 | ENST00000611953 | 196 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | RPL36A-210 | ENST00000614077 | 881 nt | TSL 1 (best) BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC018926.3-201 | ENST00000618841 | 406 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | CALU-203 | ENST00000479257 | 2572 nt | TSL 1 (best) BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC090771.1-201 | ENST00000585803 | 1618 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AL158163.1-201 | ENST00000603915 | 1649 nt | BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | KIAA1549L-201 | ENST00000265654 | 4492 nt | APPRIS ALT2 TSL 2 BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | CD46-204 | ENST00000357714 | 3188 nt | APPRIS ALT2 TSL 1 (best) BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | LRAT-206 | ENST00000507827 | 2654 nt | APPRIS P1 TSL 1 (best) BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | MDM4-207 | ENST00000454264 | 9926 nt | TSL 1 (best) BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | LINC02447-201 | ENST00000499242 | 1500 nt | TSL 1 (best) BASIC | 11.3 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | KRT222-202 | ENST00000394052 | 1712 nt | APPRIS P1 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | SEC62-201 | ENST00000337002 | 6568 nt | APPRIS P1 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | SALL4P7-201 | ENST00000555779 | 3120 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | FOXP2-201 | ENST00000350908 | 2638 nt | APPRIS P2 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | OR2H1-201 | ENST00000377132 | 2253 nt | APPRIS P1 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | BBOX1-202 | ENST00000525090 | 1596 nt | APPRIS P1 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | OR5M2P-202 | ENST00000641241 | 4242 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | TDRD3-209 | ENST00000621840 | 2497 nt | TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | OSGEPL1-207 | ENST00000522700 | 1779 nt | APPRIS P1 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC018688.1-201 | ENST00000636528 | 1754 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC002384.1-203 | ENST00000602761 | 3049 nt | TSL 3 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | ADAM2-201 | ENST00000265708 | 2672 nt | APPRIS P3 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | TRIM6-201 | ENST00000278302 | 3217 nt | APPRIS P1 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | NPHP3-AS1-202 | ENST00000504440 | 2507 nt | TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | MPP7-201 | ENST00000337532 | 5080 nt | APPRIS P1 TSL 5 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC008147.2-201 | ENST00000552061 | 4713 nt | TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | ALKAL2-201 | ENST00000344414 | 449 nt | TSL 3 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | RNU5E-1-201 | ENST00000362477 | 120 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | Y_RNA.785-201 | ENST00000384290 | 109 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | RNU6-125P-201 | ENST00000384505 | 107 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | TRAV14DV4-201 | ENST00000390440 | 425 nt | APPRIS P1 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | TRAV38-1-201 | ENST00000390464 | 353 nt | APPRIS P1 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | RNU6-1055P-201 | ENST00000391085 | 107 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | SSXP10-201 | ENST00000402595 | 565 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | MTERF4-205 | ENST00000407095 | 799 nt | TSL 2 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | ARSD-AS1-201 | ENST00000414053 | 816 nt | TSL 2 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AP001043.1-203 | ENST00000415824 | 407 nt | TSL 5 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | VWC2L-IT1-201 | ENST00000416430 | 467 nt | TSL 3 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AFDN-AS1-202 | ENST00000417244 | 182 nt | TSL 2 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | KRTAP3-4P-201 | ENST00000430780 | 280 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC044784.2-201 | ENST00000447297 | 366 nt | TSL 3 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC093627.1-201 | ENST00000465755 | 877 nt | TSL 3 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | RN7SL456P-201 | ENST00000469290 | 295 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | HMGB1P35-201 | ENST00000503360 | 598 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC006487.2-201 | ENST00000503624 | 577 nt | TSL 4 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC013546.1-201 | ENST00000523232 | 564 nt | TSL 4 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | MS4A7-208 | ENST00000530234 | 730 nt | TSL 3 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC145350.2-201 | ENST00000561541 | 821 nt | TSL 5 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | EEF1B2P1-201 | ENST00000567221 | 672 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC015912.1-201 | ENST00000574826 | 538 nt | TSL 3 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | ALKAL2-208 | ENST00000619265 | 496 nt | TSL 2 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC007546.1-201 | ENST00000619452 | 559 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC243725.1-201 | ENST00000637164 | 436 nt | BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | ABL2-201 | ENST00000344730 | 6910 nt | APPRIS ALT2 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | TRIQK-212 | ENST00000520686 | 1808 nt | APPRIS P1 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | TTC21A-203 | ENST00000431162 | 4209 nt | APPRIS ALT2 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | PYHIN1-203 | ENST00000368140 | 2083 nt | APPRIS P4 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | LRRTM3-201 | ENST00000361320 | 4358 nt | APPRIS P1 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | BRDT-202 | ENST00000362005 | 3409 nt | APPRIS P3 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | CCDC125-203 | ENST00000396499 | 3615 nt | APPRIS P1 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | TMEM267-201 | ENST00000397080 | 2338 nt | APPRIS P1 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | PYROXD1-201 | ENST00000240651 | 4055 nt | APPRIS P1 TSL 1 (best) BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | DCX-203 | ENST00000371993 | 9231 nt | APPRIS ALT1 TSL 5 BASIC | 11.29 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC005592.1-201 | ENST00000566527 | 1640 nt | BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC092828.1-201 | ENST00000501211 | 5391 nt | TSL 1 (best) BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | SYCP1-202 | ENST00000369522 | 3522 nt | APPRIS P1 TSL 1 (best) BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | SORBS1-219 | ENST00000607232 | 4374 nt | APPRIS ALT2 TSL 5 BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | LINC01416-201 | ENST00000563553 | 2310 nt | TSL 1 (best) BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | DEFB4A-201 | ENST00000302247 | 380 nt | APPRIS P1 TSL 1 (best) BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | TMSB4XP2-201 | ENST00000335179 | 210 nt | BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | RNA5SP218-201 | ENST00000363188 | 109 nt | BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | RNU6-1066P-201 | ENST00000363573 | 105 nt | BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | Y_RNA.252-201 | ENST00000364556 | 101 nt | BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | RNU6-996P-201 | ENST00000365438 | 107 nt | BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | LRRTM4-205 | ENST00000409911 | 2976 nt | APPRIS ALT1 TSL 5 BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AL139135.1-201 | ENST00000412675 | 209 nt | BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC009362.1-201 | ENST00000427253 | 406 nt | BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC114755.4-201 | ENST00000439114 | 443 nt | BASIC | 11.28 | □□□□□ -0.6 | | |
| APLP2 | Q06481 | AC092601.1-201 | ENST00000444526 | 383 nt | BASIC | 11.28 | □□□□□ -0.6 | | |