Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ACTBP60709 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.98□□□□□ -1.77
ACTBP60709 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ACTBP60709 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.98□□□□□ -1.77
ACTBP60709 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ACTBP60709 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.97□□□□□ -1.77
ACTBP60709 AC007342.7-201ENST00000624610 2337 ntBASIC3.97□□□□□ -1.77
ACTBP60709 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ACTBP60709 RNU4-4P-201ENST00000364588 130 ntBASIC3.97□□□□□ -1.77
ACTBP60709 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ACTBP60709 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.97□□□□□ -1.77
ACTBP60709 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.97□□□□□ -1.77
ACTBP60709 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.97□□□□□ -1.77
ACTBP60709 GLUD1P9-201ENST00000420997 1173 ntBASIC3.97□□□□□ -1.77
ACTBP60709 AL138785.1-201ENST00000425821 331 ntBASIC3.97□□□□□ -1.77
ACTBP60709 RHOT1P3-201ENST00000436571 331 ntBASIC3.97□□□□□ -1.77
ACTBP60709 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.97□□□□□ -1.77
ACTBP60709 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.97□□□□□ -1.77
ACTBP60709 RPL21P71-201ENST00000465598 459 ntBASIC3.97□□□□□ -1.77
ACTBP60709 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.97□□□□□ -1.77
ACTBP60709 AC004815.1-201ENST00000484185 331 ntBASIC3.97□□□□□ -1.77
ACTBP60709 AC090013.1-201ENST00000485147 480 ntBASIC3.97□□□□□ -1.77
ACTBP60709 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.97□□□□□ -1.77
ACTBP60709 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.97□□□□□ -1.77
ACTBP60709 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.97□□□□□ -1.77
ACTBP60709 RNU1-6P-201ENST00000516290 144 ntBASIC3.97□□□□□ -1.77
ACTBP60709 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.97□□□□□ -1.77
ACTBP60709 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.97□□□□□ -1.77
ACTBP60709 HMGN2P6-201ENST00000551091 273 ntBASIC3.97□□□□□ -1.77
ACTBP60709 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.97□□□□□ -1.77
ACTBP60709 OR7A19P-201ENST00000608051 733 ntBASIC3.97□□□□□ -1.77
ACTBP60709 AP002799.1-201ENST00000623552 423 ntBASIC3.97□□□□□ -1.77
ACTBP60709 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.97□□□□□ -1.77
ACTBP60709 AC007529.1-201ENST00000418574 2178 ntBASIC3.97□□□□□ -1.77
ACTBP60709 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ACTBP60709 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
ACTBP60709 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
ACTBP60709 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ACTBP60709 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
ACTBP60709 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ACTBP60709 KARSP3-201ENST00000571212 1504 ntBASIC3.96□□□□□ -1.78
ACTBP60709 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ACTBP60709 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
ACTBP60709 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ACTBP60709 AC103591.2-201ENST00000265259 766 ntBASIC3.96□□□□□ -1.78
ACTBP60709 RNA5SP52-201ENST00000362448 134 ntBASIC3.96□□□□□ -1.78
ACTBP60709 RNA5SP305-201ENST00000362665 119 ntBASIC3.96□□□□□ -1.78
ACTBP60709 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.96□□□□□ -1.78
ACTBP60709 CHMP1B2P-201ENST00000399581 597 ntBASIC3.96□□□□□ -1.78
ACTBP60709 AP002530.1-201ENST00000405705 684 ntBASIC3.96□□□□□ -1.78
ACTBP60709 FCF1P5-201ENST00000406490 482 ntBASIC3.96□□□□□ -1.78
ACTBP60709 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.96□□□□□ -1.78
ACTBP60709 RNU6-233P-201ENST00000410845 141 ntBASIC3.96□□□□□ -1.78
ACTBP60709 TRGV6-201ENST00000417928 299 ntBASIC3.96□□□□□ -1.78
ACTBP60709 AC073335.1-201ENST00000427776 363 ntBASIC3.96□□□□□ -1.78
ACTBP60709 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.96□□□□□ -1.78
ACTBP60709 MAPRE1P3-201ENST00000435438 796 ntBASIC3.96□□□□□ -1.78
ACTBP60709 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.96□□□□□ -1.78
ACTBP60709 CEACAMP7-201ENST00000444105 496 ntBASIC3.96□□□□□ -1.78
ACTBP60709 AC114982.2-201ENST00000461396 358 ntBASIC3.96□□□□□ -1.78
ACTBP60709 AC090142.1-201ENST00000465776 462 ntBASIC3.96□□□□□ -1.78
ACTBP60709 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.96□□□□□ -1.78
ACTBP60709 RPS6P4-201ENST00000494693 758 ntBASIC3.96□□□□□ -1.78
ACTBP60709 AC140172.1-201ENST00000502928 141 ntBASIC3.96□□□□□ -1.78
ACTBP60709 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ACTBP60709 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.96□□□□□ -1.78
ACTBP60709 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.96□□□□□ -1.78
ACTBP60709 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.96□□□□□ -1.78
ACTBP60709 AC135001.1-201ENST00000544546 283 ntBASIC3.96□□□□□ -1.78
ACTBP60709 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.96□□□□□ -1.78
ACTBP60709 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ACTBP60709 AC007424.1-203ENST00000554613 687 ntBASIC3.96□□□□□ -1.78
ACTBP60709 AC234775.3-201ENST00000564612 656 ntBASIC3.96□□□□□ -1.78
ACTBP60709 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.96□□□□□ -1.78
ACTBP60709 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.96□□□□□ -1.78
ACTBP60709 MEMO1P5-201ENST00000604810 406 ntBASIC3.96□□□□□ -1.78
ACTBP60709 GMCL1P2-201ENST00000605230 823 ntBASIC3.96□□□□□ -1.78
ACTBP60709 AC091905.2-201ENST00000623143 306 ntBASIC3.96□□□□□ -1.78
ACTBP60709 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.96□□□□□ -1.78
ACTBP60709 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ACTBP60709 AC011266.1-201ENST00000624119 3569 ntBASIC3.96□□□□□ -1.78
ACTBP60709 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.96□□□□□ -1.78
ACTBP60709 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ACTBP60709 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
ACTBP60709 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.96□□□□□ -1.78
ACTBP60709 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ACTBP60709 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
ACTBP60709 XIAPP3-201ENST00000312918 795 ntBASIC3.95□□□□□ -1.78
ACTBP60709 AC067945.1-201ENST00000342609 618 ntBASIC3.95□□□□□ -1.78
ACTBP60709 SNORA74A-201ENST00000364089 198 ntBASIC3.95□□□□□ -1.78
ACTBP60709 RNA5SP513-201ENST00000364648 118 ntBASIC3.95□□□□□ -1.78
ACTBP60709 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
ACTBP60709 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ACTBP60709 VN1R8P-201ENST00000407739 893 ntBASIC3.95□□□□□ -1.78
ACTBP60709 AC114755.2-201ENST00000413520 361 ntBASIC3.95□□□□□ -1.78
ACTBP60709 RPL23AP27-201ENST00000415161 451 ntBASIC3.95□□□□□ -1.78
ACTBP60709 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.95□□□□□ -1.78
ACTBP60709 AC062016.2-201ENST00000420950 676 ntBASIC3.95□□□□□ -1.78
ACTBP60709 AC073464.3-201ENST00000422564 712 ntBASIC3.95□□□□□ -1.78
ACTBP60709 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms