Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.19□□□□□ -1.58
CLRN1P58418 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLRN1P58418 FRG2FP-204ENST00000453982 852 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AL122020.1-201ENST00000472287 459 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC117394.1-201ENST00000477323 567 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 RN7SL57P-201ENST00000493687 290 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 RN7SL649P-201ENST00000496974 275 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.19□□□□□ -1.58
CLRN1P58418 RNA5SP135-201ENST00000517019 125 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 RNA5SP340-201ENST00000517132 107 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 OR7K1P-201ENST00000546439 926 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.19□□□□□ -1.58
CLRN1P58418 CYCSP38-201ENST00000559840 322 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.19□□□□□ -1.58
CLRN1P58418 EIF1P4-201ENST00000572664 335 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 AC010487.1-201ENST00000594408 1172 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AL390816.3-201ENST00000604527 1066 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 RBM11P1-201ENST00000604951 799 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 FAM27E4-201ENST00000605259 342 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC091946.2-201ENST00000606105 291 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC106028.5-201ENST00000610332 395 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 MIR6809-201ENST00000612189 116 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 MIR6793-201ENST00000612376 63 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC025594.3-201ENST00000613068 790 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 MIR7844-201ENST00000616161 122 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.19□□□□□ -1.58
CLRN1P58418 AC006927.3-201ENST00000638789 384 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
CLRN1P58418 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLRN1P58418 IFIT1P1-201ENST00000400497 1449 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.19□□□□□ -1.58
CLRN1P58418 AF287957.1-201ENST00000607368 1595 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CLRN1P58418 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
CLRN1P58418 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLRN1P58418 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLRN1P58418 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLRN1P58418 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLRN1P58418 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLRN1P58418 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.18□□□□□ -1.58
CLRN1P58418 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLRN1P58418 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLRN1P58418 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
CLRN1P58418 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.18□□□□□ -1.58
CLRN1P58418 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLRN1P58418 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLRN1P58418 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLRN1P58418 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLRN1P58418 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLRN1P58418 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLRN1P58418 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLRN1P58418 AL121657.1-201ENST00000327215 531 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLRN1P58418 RNU6-1066P-201ENST00000363573 105 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 RN7SKP186-201ENST00000365371 303 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 ATP5F1P4-201ENST00000397288 746 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 CYCSP45-201ENST00000402289 315 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 AL590290.1-201ENST00000405336 380 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.18□□□□□ -1.58
CLRN1P58418 AL450992.3-201ENST00000413192 568 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.18□□□□□ -1.58
CLRN1P58418 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.18□□□□□ -1.58
CLRN1P58418 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.18□□□□□ -1.58
CLRN1P58418 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.18□□□□□ -1.58
CLRN1P58418 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.18□□□□□ -1.58
CLRN1P58418 AC002069.1-201ENST00000429649 1159 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.18□□□□□ -1.58
CLRN1P58418 TCEA1P3-201ENST00000443005 880 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 DNAJC19P5-201ENST00000443295 316 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 YWHAQP9-201ENST00000445891 512 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 AC023271.1-201ENST00000445936 1090 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.18□□□□□ -1.58
CLRN1P58418 SUMO2P2-201ENST00000456482 255 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.18□□□□□ -1.58
CLRN1P58418 AC015724.1-201ENST00000478577 156 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 LSM3P4-201ENST00000502948 309 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 PRELID3BP7-201ENST00000503606 469 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 AC011352.3-201ENST00000505162 593 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 AC090071.1-201ENST00000507713 644 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 ST13P12-201ENST00000508958 1094 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 CDC42P4-201ENST00000510507 563 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.18□□□□□ -1.58
CLRN1P58418 TCP11X3P-202ENST00000514289 1254 ntBASIC5.18□□□□□ -1.58
CLRN1P58418 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.18□□□□□ -1.58
CLRN1P58418 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.18□□□□□ -1.58
CLRN1P58418 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.18□□□□□ -1.58
CLRN1P58418 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms