Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNA5SP43-201ENST00000516559 110 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 RN7SKP260-201ENST00000516907 149 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AF186190.1-201ENST00000517470 480 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.24□□□□□ -1.57
HDAC4P56524 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.24□□□□□ -1.57
HDAC4P56524 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.24□□□□□ -1.57
HDAC4P56524 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.24□□□□□ -1.57
HDAC4P56524 AC022882.1-201ENST00000532142 501 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDAC4P56524 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.24□□□□□ -1.57
HDAC4P56524 AC092490.3-201ENST00000545370 572 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 HAUS8P1-201ENST00000549005 542 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.24□□□□□ -1.57
HDAC4P56524 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.24□□□□□ -1.57
HDAC4P56524 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.24□□□□□ -1.57
HDAC4P56524 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HDAC4P56524 AC133552.5-201ENST00000604266 540 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AC025175.1-201ENST00000606482 759 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AC027449.1-201ENST00000608890 407 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AC090912.3-201ENST00000609775 533 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AC008759.3-201ENST00000613300 508 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AL050303.3-201ENST00000613704 284 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 BX005214.3-202ENST00000619809 325 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AP003476.1-201ENST00000623984 516 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AL445984.1-201ENST00000637834 659 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 AC073869.10-201ENST00000642016 354 ntBASIC5.24□□□□□ -1.57
HDAC4P56524 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HDAC4P56524 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HDAC4P56524 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
HDAC4P56524 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
HDAC4P56524 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.24□□□□□ -1.57
HDAC4P56524 OR14L1P-202ENST00000641545 3009 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HDAC4P56524 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HDAC4P56524 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
HDAC4P56524 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HDAC4P56524 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.23□□□□□ -1.57
HDAC4P56524 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.23□□□□□ -1.57
HDAC4P56524 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HDAC4P56524 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
HDAC4P56524 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HDAC4P56524 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HDAC4P56524 MIR320B1-201ENST00000390209 79 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 RNU6-796P-201ENST00000391086 107 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 LRRC37BP1-201ENST00000398851 714 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.23□□□□□ -1.57
HDAC4P56524 AC011242.1-201ENST00000433596 1158 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 GTF3AP5-201ENST00000442645 697 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 FHP1-201ENST00000442741 703 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 RPS27P5-201ENST00000444247 244 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.23□□□□□ -1.57
HDAC4P56524 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.23□□□□□ -1.57
HDAC4P56524 AC008379.1-201ENST00000463655 464 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 PPM1AP1-201ENST00000502740 1135 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.23□□□□□ -1.57
HDAC4P56524 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.23□□□□□ -1.57
HDAC4P56524 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.23□□□□□ -1.57
HDAC4P56524 COX6B1P5-201ENST00000509843 249 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 BUD31P1-201ENST00000521828 359 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.23□□□□□ -1.57
HDAC4P56524 OR7E128P-201ENST00000532736 1024 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.23□□□□□ -1.57
HDAC4P56524 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
HDAC4P56524 AL049870.4-201ENST00000555741 486 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.23□□□□□ -1.57
HDAC4P56524 AC104229.1-201ENST00000561364 255 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 AGGF1P9-201ENST00000561884 913 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.23□□□□□ -1.57
HDAC4P56524 AC116553.2-201ENST00000564203 463 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HDAC4P56524 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.23□□□□□ -1.57
HDAC4P56524 MIR4691-201ENST00000583764 85 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.23□□□□□ -1.57
HDAC4P56524 EIF1P5-201ENST00000585002 234 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 AC104785.1-201ENST00000603220 588 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 AC233280.2-201ENST00000603917 1070 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 AP005229.2-201ENST00000609980 697 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.23□□□□□ -1.57
HDAC4P56524 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.23□□□□□ -1.57
HDAC4P56524 AP000648.2-201ENST00000624182 404 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 AC073342.3-201ENST00000624211 193 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 SCARNA15-201ENST00000607520 4325 ntBASIC5.23□□□□□ -1.57
HDAC4P56524 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HDAC4P56524 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HDAC4P56524 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.23□□□□□ -1.57
HDAC4P56524 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.23□□□□□ -1.57
HDAC4P56524 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HDAC4P56524 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.23□□□□□ -1.57
HDAC4P56524 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.23□□□□□ -1.57
HDAC4P56524 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HDAC4P56524 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.22□□□□□ -1.57
HDAC4P56524 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.22□□□□□ -1.57
HDAC4P56524 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HDAC4P56524 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HDAC4P56524 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
HDAC4P56524 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HDAC4P56524 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HDAC4P56524 SNORA70.10-201ENST00000384515 134 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 SNORA66-201ENST00000384792 133 ntBASIC5.22□□□□□ -1.57
HDAC4P56524 MIR765-201ENST00000390226 114 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms