Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC8.45□□□□□ -1.06
ATN1P54259 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC8.44□□□□□ -1.06
ATN1P54259 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATN1P54259 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATN1P54259 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
ATN1P54259 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATN1P54259 AC134882.1-201ENST00000603738 1676 ntBASIC8.44□□□□□ -1.06
ATN1P54259 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATN1P54259 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC8.44□□□□□ -1.06
ATN1P54259 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATN1P54259 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATN1P54259 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC8.44□□□□□ -1.06
ATN1P54259 AC004986.1-201ENST00000414855 607 ntBASIC8.44□□□□□ -1.06
ATN1P54259 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC8.44□□□□□ -1.06
ATN1P54259 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.44□□□□□ -1.06
ATN1P54259 AL590682.1-201ENST00000437248 344 ntBASIC8.44□□□□□ -1.06
ATN1P54259 AC093156.1-201ENST00000440382 670 ntBASIC8.44□□□□□ -1.06
ATN1P54259 OR13K1P-201ENST00000444577 975 ntBASIC8.44□□□□□ -1.06
ATN1P54259 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
ATN1P54259 AKIRIN2P1-201ENST00000505898 352 ntBASIC8.44□□□□□ -1.06
ATN1P54259 AC105758.1-201ENST00000506038 399 ntBASIC8.44□□□□□ -1.06
ATN1P54259 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC8.44□□□□□ -1.06
ATN1P54259 PGAM1P13-201ENST00000507497 754 ntBASIC8.44□□□□□ -1.06
ATN1P54259 Y_RNA.662-201ENST00000516028 97 ntBASIC8.44□□□□□ -1.06
ATN1P54259 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC8.44□□□□□ -1.06
ATN1P54259 AC007991.1-201ENST00000522680 631 ntBASIC8.44□□□□□ -1.06
ATN1P54259 SNX18P27-201ENST00000523611 779 ntBASIC8.44□□□□□ -1.06
ATN1P54259 STX3-204ENST00000530221 534 ntTSL 5 BASIC8.44□□□□□ -1.06
ATN1P54259 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC8.44□□□□□ -1.06
ATN1P54259 RPA2P3-201ENST00000533268 770 ntBASIC8.44□□□□□ -1.06
ATN1P54259 AC138749.2-201ENST00000566048 167 ntBASIC8.44□□□□□ -1.06
ATN1P54259 AC092718.4-201ENST00000566639 716 ntBASIC8.44□□□□□ -1.06
ATN1P54259 RN7SL66P-201ENST00000582099 264 ntBASIC8.44□□□□□ -1.06
ATN1P54259 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC8.44□□□□□ -1.06
ATN1P54259 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC8.44□□□□□ -1.06
ATN1P54259 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC8.44□□□□□ -1.06
ATN1P54259 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
ATN1P54259 JAML-213ENST00000640745 951 ntTSL 5 BASIC8.44□□□□□ -1.06
ATN1P54259 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ATN1P54259 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATN1P54259 DLD-204ENST00000437604 1859 ntTSL 2 BASIC8.44□□□□□ -1.06
ATN1P54259 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
ATN1P54259 ZNF72P-201ENST00000425869 1908 ntBASIC8.44□□□□□ -1.06
ATN1P54259 HDAC1P2-201ENST00000453661 1398 ntBASIC8.44□□□□□ -1.06
ATN1P54259 ARHGAP42P1-201ENST00000507474 1976 ntBASIC8.44□□□□□ -1.06
ATN1P54259 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
ATN1P54259 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.44□□□□□ -1.06
ATN1P54259 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC8.44□□□□□ -1.06
ATN1P54259 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ATN1P54259 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATN1P54259 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
ATN1P54259 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC8.44□□□□□ -1.06
ATN1P54259 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
ATN1P54259 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
ATN1P54259 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
ATN1P54259 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ATN1P54259 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ATN1P54259 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC8.43□□□□□ -1.06
ATN1P54259 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ATN1P54259 NF1P1-201ENST00000604105 2645 ntBASIC8.43□□□□□ -1.06
ATN1P54259 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ATN1P54259 OR5M2P-202ENST00000641241 4242 ntBASIC8.43□□□□□ -1.06
ATN1P54259 AC092999.1-201ENST00000624004 1924 ntBASIC8.43□□□□□ -1.06
ATN1P54259 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
ATN1P54259 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC8.43□□□□□ -1.06
ATN1P54259 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ATN1P54259 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
ATN1P54259 RNU4-81P-201ENST00000363561 144 ntBASIC8.43□□□□□ -1.06
ATN1P54259 RNU6-853P-201ENST00000364306 107 ntBASIC8.43□□□□□ -1.06
ATN1P54259 RNU6-39P-201ENST00000384344 107 ntBASIC8.43□□□□□ -1.06
ATN1P54259 MIR558-201ENST00000384920 94 ntBASIC8.43□□□□□ -1.06
ATN1P54259 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
ATN1P54259 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ATN1P54259 AC140479.3-201ENST00000418944 1126 ntBASIC8.43□□□□□ -1.06
ATN1P54259 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC8.43□□□□□ -1.06
ATN1P54259 AC012075.1-201ENST00000436549 580 ntBASIC8.43□□□□□ -1.06
ATN1P54259 AL138899.2-201ENST00000439139 499 ntBASIC8.43□□□□□ -1.06
ATN1P54259 AL451074.4-201ENST00000447545 470 ntBASIC8.43□□□□□ -1.06
ATN1P54259 RPS15AP27-201ENST00000449183 343 ntBASIC8.43□□□□□ -1.06
ATN1P54259 HMGB3P21-201ENST00000452483 547 ntBASIC8.43□□□□□ -1.06
ATN1P54259 RPL23P10-201ENST00000468780 412 ntBASIC8.43□□□□□ -1.06
ATN1P54259 RN7SL233P-201ENST00000469988 277 ntBASIC8.43□□□□□ -1.06
ATN1P54259 AC104563.1-201ENST00000476147 376 ntBASIC8.43□□□□□ -1.06
ATN1P54259 RPL23AP41-201ENST00000484754 458 ntBASIC8.43□□□□□ -1.06
ATN1P54259 RPS27P23-201ENST00000487608 251 ntBASIC8.43□□□□□ -1.06
ATN1P54259 RNA5SP170-201ENST00000517150 101 ntBASIC8.43□□□□□ -1.06
ATN1P54259 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.43□□□□□ -1.06
ATN1P54259 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC8.43□□□□□ -1.06
ATN1P54259 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.43□□□□□ -1.06
ATN1P54259 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC8.43□□□□□ -1.06
ATN1P54259 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC8.43□□□□□ -1.06
ATN1P54259 AC073410.2-201ENST00000603240 332 ntBASIC8.43□□□□□ -1.06
ATN1P54259 AC072026.1-201ENST00000605023 201 ntBASIC8.43□□□□□ -1.06
ATN1P54259 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ATN1P54259 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC8.43□□□□□ -1.06
ATN1P54259 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.43□□□□□ -1.06
ATN1P54259 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms