Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 OR52A4P-201ENST00000472867 958 ntBASIC4.94□□□□□ -1.62
LHX1P48742 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.94□□□□□ -1.62
LHX1P48742 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.94□□□□□ -1.62
LHX1P48742 AC010468.3-201ENST00000508225 458 ntBASIC4.94□□□□□ -1.62
LHX1P48742 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX1P48742 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.94□□□□□ -1.62
LHX1P48742 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.94□□□□□ -1.62
LHX1P48742 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX1P48742 AL390334.1-201ENST00000556395 450 ntBASIC4.94□□□□□ -1.62
LHX1P48742 AC122134.1-201ENST00000565664 1104 ntBASIC4.94□□□□□ -1.62
LHX1P48742 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX1P48742 AC021483.2-201ENST00000567415 758 ntBASIC4.94□□□□□ -1.62
LHX1P48742 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.94□□□□□ -1.62
LHX1P48742 DPRXP4-201ENST00000578053 568 ntBASIC4.94□□□□□ -1.62
LHX1P48742 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.94□□□□□ -1.62
LHX1P48742 AC069061.3-201ENST00000582254 823 ntBASIC4.94□□□□□ -1.62
LHX1P48742 AP005262.1-201ENST00000582646 997 ntBASIC4.94□□□□□ -1.62
LHX1P48742 AC093765.1-201ENST00000603758 881 ntBASIC4.94□□□□□ -1.62
LHX1P48742 AP006248.3-201ENST00000623580 594 ntBASIC4.94□□□□□ -1.62
LHX1P48742 AC106730.3-201ENST00000624568 641 ntBASIC4.94□□□□□ -1.62
LHX1P48742 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX1P48742 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LHX1P48742 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.94□□□□□ -1.62
LHX1P48742 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.94□□□□□ -1.62
LHX1P48742 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
LHX1P48742 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LHX1P48742 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.94□□□□□ -1.62
LHX1P48742 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX1P48742 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LHX1P48742 OR14L1P-202ENST00000641545 3009 ntBASIC4.94□□□□□ -1.62
LHX1P48742 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX1P48742 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.93□□□□□ -1.62
LHX1P48742 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.93□□□□□ -1.62
LHX1P48742 Z98755.1-201ENST00000407015 1384 ntBASIC4.93□□□□□ -1.62
LHX1P48742 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LHX1P48742 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LHX1P48742 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.93□□□□□ -1.62
LHX1P48742 AL132640.2-201ENST00000559968 1698 ntBASIC4.93□□□□□ -1.62
LHX1P48742 AC006971.1-201ENST00000407916 4486 ntBASIC4.93□□□□□ -1.62
LHX1P48742 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LHX1P48742 RAD1P1-201ENST00000231383 813 ntBASIC4.93□□□□□ -1.62
LHX1P48742 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LHX1P48742 RN7SKP74-201ENST00000362849 309 ntBASIC4.93□□□□□ -1.62
LHX1P48742 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LHX1P48742 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LHX1P48742 AL080315.1-201ENST00000406055 466 ntBASIC4.93□□□□□ -1.62
LHX1P48742 RN7SKP216-201ENST00000411050 312 ntBASIC4.93□□□□□ -1.62
LHX1P48742 AC068287.1-201ENST00000430283 295 ntBASIC4.93□□□□□ -1.62
LHX1P48742 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.93□□□□□ -1.62
LHX1P48742 YWHAZP2-201ENST00000440317 728 ntBASIC4.93□□□□□ -1.62
LHX1P48742 AC023512.1-201ENST00000444513 499 ntBASIC4.93□□□□□ -1.62
LHX1P48742 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.93□□□□□ -1.62
LHX1P48742 HAUS1P1-201ENST00000505275 832 ntBASIC4.93□□□□□ -1.62
LHX1P48742 AC135352.1-201ENST00000506173 1418 ntBASIC4.93□□□□□ -1.62
LHX1P48742 RNA5SP303-201ENST00000516192 130 ntBASIC4.93□□□□□ -1.62
LHX1P48742 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LHX1P48742 AC004923.2-201ENST00000529649 369 ntBASIC4.93□□□□□ -1.62
LHX1P48742 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.93□□□□□ -1.62
LHX1P48742 OR8X1P-201ENST00000534542 869 ntBASIC4.93□□□□□ -1.62
LHX1P48742 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.93□□□□□ -1.62
LHX1P48742 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.93□□□□□ -1.62
LHX1P48742 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.93□□□□□ -1.62
LHX1P48742 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.93□□□□□ -1.62
LHX1P48742 AL592148.3-201ENST00000608771 2646 ntBASIC4.93□□□□□ -1.62
LHX1P48742 AC092574.1-201ENST00000609771 420 ntBASIC4.93□□□□□ -1.62
LHX1P48742 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LHX1P48742 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.93□□□□□ -1.62
LHX1P48742 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LHX1P48742 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.93□□□□□ -1.62
LHX1P48742 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LHX1P48742 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LHX1P48742 AC108751.5-201ENST00000492880 1336 ntBASIC4.93□□□□□ -1.62
LHX1P48742 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.93□□□□□ -1.62
LHX1P48742 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LHX1P48742 VPS35P1-201ENST00000563400 1518 ntBASIC4.92□□□□□ -1.62
LHX1P48742 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.92□□□□□ -1.62
LHX1P48742 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
LHX1P48742 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.92□□□□□ -1.62
LHX1P48742 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.92□□□□□ -1.62
LHX1P48742 AL359715.4-201ENST00000606629 1436 ntBASIC4.92□□□□□ -1.62
LHX1P48742 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LHX1P48742 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX1P48742 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LHX1P48742 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.92□□□□□ -1.62
LHX1P48742 AL034374.1-201ENST00000406329 351 ntBASIC4.92□□□□□ -1.62
LHX1P48742 FAR2P2-201ENST00000413041 594 ntBASIC4.92□□□□□ -1.62
LHX1P48742 AL807761.1-201ENST00000417622 171 ntBASIC4.92□□□□□ -1.62
LHX1P48742 UQCRBP1-201ENST00000421129 336 ntBASIC4.92□□□□□ -1.62
LHX1P48742 ARL2BPP3-201ENST00000421226 480 ntBASIC4.92□□□□□ -1.62
LHX1P48742 FAR2P4-202ENST00000425399 584 ntBASIC4.92□□□□□ -1.62
LHX1P48742 DNAJC19P7-201ENST00000428811 344 ntBASIC4.92□□□□□ -1.62
LHX1P48742 RPL23AP1-201ENST00000428990 471 ntBASIC4.92□□□□□ -1.62
LHX1P48742 CNOT7P1-201ENST00000429006 852 ntBASIC4.92□□□□□ -1.62
LHX1P48742 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.92□□□□□ -1.62
LHX1P48742 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.92□□□□□ -1.62
LHX1P48742 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.92□□□□□ -1.62
LHX1P48742 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.92□□□□□ -1.62
LHX1P48742 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.92□□□□□ -1.62
LHX1P48742 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.92□□□□□ -1.62
LHX1P48742 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms